RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 ADCY10Q96PN6 1610 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 PATJQ8NI35 1801 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 TRAV22A0A0B4J277 110 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 UBE2D3P61077 147 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 UBE2D2P62837 147 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 Q5VV11 94 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 FAM223AQ8IWN6 122 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 C18orf32Q8TCD1 76 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 FAM167A-AS1Q96KT0 104 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 MANBALQ9NQG1 85 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 ATP10BO94823 1461 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 MLH3Q9UHC1 1453 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 IQGAP3Q86VI3 1631 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 COL4A6Q14031 1691 aa2.05□□□□□ -2.08
CCDC50-203ENST00000460064 TRBV7-3A0A075B6L6 115 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 LAMB4A4D0S4 1761 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 LTN1O94822 1766 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 ABCA8O94911 1581 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 UBE2D1P51668 147 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 C10orf128Q5T292 105 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 ZNF818PQ6ZRF7 136 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 SUPT6HQ7KZ85 1726 aaKnown RBP2.04□□□□□ -2.08
CCDC50-203ENST00000460064 VMO1Q7Z5L0 202 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 NDUFA11Q86Y39 141 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 Q8N6K4 173 aa2.04□□□□□ -2.08
CCDC50-203ENST00000460064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.04□□□□□ -2.08
CCDC50-203ENST00000460064 SORL1Q92673 2214 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 MYO18AQ92614 2054 aaKnown RBP2.03□□□□□ -2.08
CCDC50-203ENST00000460064 MICAL3Q7RTP6 2002 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 CASP8AP2Q9UKL3 1982 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 COL4A5P29400 1685 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 PREX1Q8TCU6 1659 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 ABCA10Q8WWZ4 1543 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 ABCC2Q92887 1545 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 NRXN1Q9ULB1 1477 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 HFM1A2PYH4 1435 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 EEA1Q15075 1411 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 TRBV10-1A0A0K0K1A3 114 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 KANTRA0A1W2PQU2 76 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 CLPSL1A2RUU4 121 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 NUPR2A6NF83 97 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 C10orf142B7Z368 130 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 HMGN3Q15651 99 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 PMCHL1Q16048 86 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 SFTA2Q6UW10 78 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 LIMD2Q9BT23 127 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 PRO1854Q9UHT4 67 aa2.03□□□□□ -2.08
CCDC50-203ENST00000460064 DOCK2Q92608 1830 aa2.03□□□□□ -2.09
CCDC50-203ENST00000460064 LAMB2P55268 1798 aa2.03□□□□□ -2.09
CCDC50-203ENST00000460064 COL4A1P02462 1669 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 KIAA0556O60303 1618 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 MAP3K4Q9Y6R4 1608 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 UNC13BO14795 1591 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 BLMP54132 1417 aaPredicted RBP2.02□□□□□ -2.09
CCDC50-203ENST00000460064 TCHHQ07283 1943 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 MYH4Q9Y623 1939 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 IGKV3-7A0A075B6H7 116 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 SNRPFP62306 86 aaKnown RBP2.02□□□□□ -2.09
CCDC50-203ENST00000460064 KLKP1Q107X0 134 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 CFAP126Q5VTH2 177 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 PATE1Q8WXA2 126 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 MRPL36Q9P0J6 103 aaKnown RBP2.02□□□□□ -2.09
CCDC50-203ENST00000460064 TANC1Q9C0D5 1861 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 PEAK1Q9H792 1746 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 TMEM131LA2VDJ0 1609 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 MROH1Q8NDA8 1641 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 CFAP74Q9C0B2 1584 aa2.02□□□□□ -2.09
CCDC50-203ENST00000460064 INO80Q9ULG1 1556 aaPredicted RBP2.02□□□□□ -2.09
CCDC50-203ENST00000460064 CPS1P31327 1500 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 A0A0J9YY99 117 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 F2Z2F3 143 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 CHKB-CPT1BH3BT56 60 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 BCE1O60756 84 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 ORMDL1Q9P0S3 153 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 CUL9Q8IWT3 2517 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 CUX1P39880 1505 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 LRRC7Q96NW7 1537 aa2.01□□□□□ -2.09
CCDC50-203ENST00000460064 MED13Q9UHV7 2174 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 NINQ8N4C6 2090 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 KNDC1Q76NI1 1749 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 CR1P17927 2039 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 PTPN23Q9H3S7 1636 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 ZFHX2Q9C0A1 2572 aaPredicted RBP2□□□□□ -2.09
CCDC50-203ENST00000460064 TRBV6-8A0A0A6YYG3 113 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 EDDM3BP56851 147 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 GNGT1P63211 74 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 ELOBQ15370 118 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 DMAC1Q96GE9 116 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 CDC42SE2Q9NRR3 84 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 UBR1Q8IWV7 1749 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 MYO5CQ9NQX4 1742 aa2□□□□□ -2.09
CCDC50-203ENST00000460064 RAPGEF6Q8TEU7 1601 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 TMEM14DPA8MWL7 114 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 LINC00643Q86TS7 51 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms