RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 CHTF8P0CG12 524 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 RAB5CP51148 216 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 REG3AQ06141 175 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 IQCJQ1A5X6 159 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 FAM213BQ8TBF2 198 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 SFT2D1Q8WV19 159 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 MBD3L1Q8WWY6 194 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 IGHV3-64A0A075B6Q5 118 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 A0A087WYN8 130 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 SMLR1H3BR10 107 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 GZMBP10144 247 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 NKX2-5P52952 324 aaPredicted RBP4.52□□□□□ -1.69
RFX3-205ENST00000420720 CNBPP62633 177 aaKnown RBP4.52□□□□□ -1.69
RFX3-205ENST00000420720 Q6ZRU5 148 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 KCNRGQ8N5I3 272 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 GFRA4Q9GZZ7 299 aa4.52□□□□□ -1.69
RFX3-205ENST00000420720 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.51□□□□□ -1.69
RFX3-205ENST00000420720 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 M0QY20 66 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 P01737 135 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
RFX3-205ENST00000420720 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 FER1L6-AS1Q8NA97 138 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 TMEM243Q9BU79 118 aa4.51□□□□□ -1.69
RFX3-205ENST00000420720 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
RFX3-205ENST00000420720 H7C1H1 209 aa4.5□□□□□ -1.69
RFX3-205ENST00000420720 IGLC6P0CF74 106 aa4.5□□□□□ -1.69
RFX3-205ENST00000420720 RPL35P42766 123 aaKnown RBP4.5□□□□□ -1.69
RFX3-205ENST00000420720 OR2D3Q8NGH3 330 aa4.5□□□□□ -1.69
RFX3-205ENST00000420720 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
RFX3-205ENST00000420720 A0A1B0GUV1 79 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 GAGE12HA6NDE8 117 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 UMAD1C9J7I0 102 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 PHOX2AO14813 284 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 UBE2L6O14933 153 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 SULT1A2P50226 295 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 RPS20P60866 119 aaKnown RBP4.49□□□□□ -1.69
RFX3-205ENST00000420720 CACNG7P62955 275 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 CCL20P78556 96 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 HIGD2BQ4VC39 106 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 CENPWQ5EE01 88 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 WDR73Q6P4I2 378 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 RASL11AQ6T310 242 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 RNF185Q96GF1 192 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 DPH3P1Q9H4G8 78 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 BATF3Q9NR55 127 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
RFX3-205ENST00000420720 RAB19A4D1S5 217 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 C19orf71A6NCJ1 209 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 TRGC1P0CF51 173 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 NTF3P20783 257 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 AMTP48728 403 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 COX6A2Q02221 97 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 COTL1Q14019 142 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 MAJINQ3KP22 176 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 C15orf56Q8N910 161 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 C7orf33Q8WU49 177 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 C11orf52Q96A22 123 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 PGLYRP4Q96LB8 373 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
RFX3-205ENST00000420720 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 KANTRA0A1W2PQU2 76 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 BCL2L11O43521 198 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 NDUFS6O75380 124 aaKnown RBP4.47□□□□□ -1.69
RFX3-205ENST00000420720 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
RFX3-205ENST00000420720 ZNF345Q14585 488 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 ODF1Q14990 250 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 LYPD6BQ8NI32 183 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 MANBALQ9NQG1 85 aa4.47□□□□□ -1.69
RFX3-205ENST00000420720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.46□□□□□ -1.7
RFX3-205ENST00000420720 TRAV26-2A0A0B4J265 109 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 IGKV2-29A2NJV5 120 aaPredicted RBP4.46□□□□□ -1.7
RFX3-205ENST00000420720 XKRY2A2RUG3 117 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 HMSDA8MTL9 139 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 F2Z2F3 143 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 IFNA1P01562 189 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 GNG4P50150 75 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 RGS21Q2M5E4 152 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 STPG4Q8N801 248 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 GATD1Q8NB37 220 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.7
RFX3-205ENST00000420720 MED9Q9NWA0 146 aa4.46□□□□□ -1.7
RFX3-205ENST00000420720 TRBV20OR9-2A0A075B6H5 130 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
RFX3-205ENST00000420720 TWIST1Q15672 202 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 AMMECR1LQ6DCA0 310 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 RNASEKQ6P5S7 137 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms