RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 Q0VG73 95 aa8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 MRPL52Q86TS9 123 aaKnown RBP8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 GNB1LQ9BYB4 327 aa8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
SIRPB3P-201ENST00000340424 H3BS24 57 aa8.98□□□□□ -0.97
SIRPB3P-201ENST00000340424 WDR73Q6P4I2 378 aa8.98□□□□□ -0.97
SIRPB3P-201ENST00000340424 RASL11AQ6T310 242 aa8.98□□□□□ -0.97
SIRPB3P-201ENST00000340424 FAM231DQ6ZW35 169 aa8.98□□□□□ -0.97
SIRPB3P-201ENST00000340424 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
SIRPB3P-201ENST00000340424 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 A0A087WTM6 91 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 PSCAO43653 123 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 IGLV2-8P01709 118 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 CHCHD7Q9BUK0 85 aa8.97□□□□□ -0.97
SIRPB3P-201ENST00000340424 SMIM27A0A1W2PRY6 76 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 C19orf71A6NCJ1 209 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 P01737 135 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 IGHV3-30P01768 117 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 IGHV3-33P01772 117 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 SMIM17P0DL12 118 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 IGHV3-30-3P0DP02 117 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 SSTP61278 116 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 CACNG7P62955 275 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 ZNF56Q15929 161 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 FER1L6-AS1Q8NA97 138 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 TM2D2Q9BX73 214 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 Q9UF83 564 aa8.96□□□□□ -0.98
SIRPB3P-201ENST00000340424 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 F2Z2F3 143 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 LINC00310P59036 64 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 UBE2D3P61077 147 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 UBE2D2P62837 147 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 OR2D3Q8NGH3 330 aa8.95□□□□□ -0.98
SIRPB3P-201ENST00000340424 HLA-DQA1P01909 254 aa8.94□□□□□ -0.98
SIRPB3P-201ENST00000340424 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
SIRPB3P-201ENST00000340424 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
SIRPB3P-201ENST00000340424 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 NIT1Q86X76 327 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 RMI2Q96E14 147 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 TPPP3Q9BW30 176 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 PRO1933Q9H354 126 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 Q9HAA7 133 aa8.93□□□□□ -0.98
SIRPB3P-201ENST00000340424 A0A087WX48 190 aa8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 F5H697 171 aa8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 H7C1H1 209 aa8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 NEXN-AS1Q8NBZ9 246 aa8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 KIF25-AS1Q9Y6Z4 181 aa8.92□□□□□ -0.98
SIRPB3P-201ENST00000340424 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 MUC21A0A0G2JKD1 596 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 MUC21A0A140T8X8 626 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 NUPR1O60356 82 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
SIRPB3P-201ENST00000340424 SERF1AO75920 110 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 CT83Q5H943 113 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 ATP5L2Q7Z4Y8 100 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 CNFNQ9BYD5 112 aa8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.98
SIRPB3P-201ENST00000340424 CTRLP40313 264 aa8.89□□□□□ -0.99
SIRPB3P-201ENST00000340424 Q8N3U1 123 aa8.89□□□□□ -0.99
SIRPB3P-201ENST00000340424 Q8N814 137 aa8.89□□□□□ -0.99
SIRPB3P-201ENST00000340424 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 GCSHP23434 173 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 Q8N1X5 172 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 DPH3P1Q9H4G8 78 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
SIRPB3P-201ENST00000340424 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 FAM231BA6NCW3 169 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 M0QY20 66 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 MGPP08493 103 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 RAB4AP20338 218 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 NTF3P20783 257 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 BAGE3Q86Y29 109 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 KLK12Q9UKR0 248 aa8.87□□□□□ -0.99
SIRPB3P-201ENST00000340424 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
SIRPB3P-201ENST00000340424 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
SIRPB3P-201ENST00000340424 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
SIRPB3P-201ENST00000340424 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
SIRPB3P-201ENST00000340424 Q8N976 141 aa8.86□□□□□ -0.99
SIRPB3P-201ENST00000340424 GFRA4Q9GZZ7 299 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms