RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 2410004P03RikA0A087WQY2 205 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Sigmar1O55242 223 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 SeleQ00690 612 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Cdkn2aQ64364 169 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ankrd55Q8BLD6 626 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Mapk1ip1Q9D7G9 263 aa12.25□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ms4a12A0A087WSB9 263 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Trbv12-1A0A0B4J1H0 124 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 GzmbP04187 247 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Saa3P04918 122 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Olfr1350Q8VF34 308 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 TracA0A075B662 137 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Iqcf6G3UWF2 157 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 SlpiP97430 131 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Il12rb1Q60837 738 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 GrhprQ91Z53 328 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Znf319Q9ERR8 581 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ighv4-1A0A075B5R5 116 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ighv1-62-2A0A0A6YXZ4 119 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Tmem200bD3Z0P8 284 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Cxcl10P17515 98 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 TgfaP48030 159 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm45871A0A1B0GRI9 540 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 9930021J03RikH3BKP8 2027 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ins2P01326 110 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Il3raP26952 396 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Cd52Q64389 74 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 6330409D20RikA2AK85 162 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Trav6-2Q5R1I4 113 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Fam214bQ8BR27 538 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Tspan2Q922J6 221 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Mrps36Q9CQX8 102 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ndufb3Q9CQZ6 104 aa12.24□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 KcpQ3U492 1550 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 MrapQ9D159 127 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Klk1b27Q9JM71 263 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Trav13n-4A0A0G2JG01 110 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 BC030500E9Q6W0 185 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm21976J3QNN2 249 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Scgb1b2O35176 93 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Hoxd11P23813 323 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 TdhQ8K3F7 373 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Olfr477Q8VGI6 310 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Zfp119aQ9JIC0 545 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm6525A0A0A6YW33 106 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm21983D6RFS9 131 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 CrygsO35486 178 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm28269A0A087WSG3 125 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm933J3QPC1 141 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm10447Q3UQ92 135 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Srsf1Q6PDM2 248 aaKnown RBP12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gng5Q80SZ7 68 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ssbp2Q9CYZ8 361 aa12.23□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Dennd4aE9Q8V6 1869 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Trav8-1A0A075B641 109 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm29644A0A087WPG2 191 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 P18530 117 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Atp6v0bQ91V37 205 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 BmfQ91ZE9 185 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Pf4Q9Z126 105 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Tmem29A2ANF5 204 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm14548E9Q1Z6 680 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ypel2Q65Z95 119 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Ypel1Q9ESC7 118 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Smad7O35253 426 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Eid2bE9Q2Y0 151 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Col9a1Q05722 921 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Gm11232Q5SPI8 295 aa12.22□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Tmem95P0DJF3 176 aa12.21□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Siglec15A7E1W8 342 aa12.21□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Atp23Q9CWQ3 201 aa12.21□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Tmem50aQ9CXL1 157 aa12.21□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Klk4Q9Z0M1 255 aa12.21□□□□□ -0.45
Pcdha1-201ENSMUST00000070797 Nat8b-psE0CYC6 232 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gata2O09100 480 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Vgll4Q80V24 287 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 BC106179Q8C9L1 186 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rasl11bQ922H7 247 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ormdl2Q9CQZ0 153 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Hbb-bsA8DUK4 147 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Insl3O09107 122 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Hbb-b1P02088 147 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Pax8Q00288 457 aa12.21□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 ApohQ01339 345 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Q6DIA7 600 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Arid2E9Q7E2 1828 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rps2-ps6A0A140T8L5 221 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Awat1A2ADU9 328 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gtf3aQ8VHT7 364 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Siglec12Q91Y57 467 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Nup37Q9CWU9 326 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Pmaip1Q9JM54 103 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Osr1Q9WVG7 266 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 P01657 111 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Khdc1cQ4KL78 166 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trav6d-3A0A075B6B3 112 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ighv1-76A0A0G2JFE9 117 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Lgals6O54891 301 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 C2cd4dP0CG09 341 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 AdmP97297 184 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms