RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pfn1P62962 140 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Spred3Q6P6N5 408 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Znrf2Q71FD5 238 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Fam19a2Q7TPG7 131 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Plpp2Q9DAX2 276 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Dkk2Q9QYZ8 259 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Smlr1J3QMJ4 66 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Lgals6O54891 301 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cox8bP48772 70 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Mrps11Q9DCA2 191 aaKnown RBP8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 P18525 117 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cks1bP61025 79 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cacng7P62956 275 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ndufa2Q9CQ75 99 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Tmem50aQ9CXL1 157 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ighv5-4A0A075B5P9 117 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Trbv12-2A0A0B4J1H1 124 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Morn3Q8C5T4 241 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Q9D8L0 127 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Tmem89Q9DA04 169 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Wdr31Q9JHB4 367 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Heatr5bQ8C547 2070 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cdkn2aQ64364 169 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Rnd1Q8BLR7 232 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 9430097D07RikQ8BS47 195 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Trav6d-3A0A075B6B3 112 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm45871A0A1B0GRI9 540 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Saa3P04918 122 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Pax8Q00288 457 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Trav6-3Q5R1E6 112 aa8.49□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Bak1O08734 209 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 ApohQ01339 345 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Defa23Q5G866 93 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Dtx1Q61010 627 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm9945Q8BNZ3 91 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Igkv6-32A0A140T8N9 115 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm21983D6RFS9 131 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 BokO35425 213 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Pax1P09084 446 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Olfr1402Q8VET1 320 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Brca1P48754 1812 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Obp2bA2BHR0 176 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Olfr235E9Q9Z6 312 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Tff3Q62395 81 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gpx7Q99LJ6 186 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 RetnQ99P87 114 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Avpi1Q9D7H4 142 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Pmaip1Q9JM54 103 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 C2cd4dP0CG09 341 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 P18530 117 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Vgll4Q80V24 287 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm14548E9Q1Z6 680 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm21789J3QMZ1 123 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm21870J3QPN2 123 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm21883J3QPV3 123 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Rspo4Q8BJ73 228 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Spaca3Q9D9X8 221 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ypel3P61237 119 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 MavsQ8VCF0 503 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Nit2Q9JHW2 276 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cd5lQ9QWK4 352 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Il17bQ9QXT6 180 aa8.48□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Igkv6-25A0A140T8N7 115 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Rps2-ps6A0A140T8L5 221 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Vmn1r70Q8R254 298 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 P01638 115 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Igh-VJ558P01758 117 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ormdl2Q9CQZ0 153 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Zfp976E9Q981 636 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Mapk1ip1Q9D7G9 263 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Rnase2bO35292 155 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Srsf1Q6PDM2 248 aaKnown RBP8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Tp53bp1P70399 1969 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Plxna1P70206 1894 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm933J3QPC1 141 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 CrxO54751 299 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Q6DIA7 600 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Olfr975Q8VG91 310 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ms4a12A0A087WSB9 263 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Eid2bE9Q2Y0 151 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 4930412O13RikQ9D5M9 106 aa8.47□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Il3raP26952 396 aa8.46□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Gm29644A0A087WPG2 191 aa8.46□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Q8BG31 207 aa8.46□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Cdcp2Q8BQH6 427 aa8.46□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Ubtd1Q91WB7 227 aa8.46□□□□□ -1.05
Ubr1-201ENSMUST00000028728 Zfp983E9PUT0 460 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Nr2c2apQ3TV70 140 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Mbnl3Q8R003 342 aaKnown RBP8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Hcfc2Q9D968 241 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Klk4Q9Z0M1 255 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Dock1Q8BUR4 1865 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Ccl2P10148 148 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Tusc5Q8C838 173 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Olfr1195Q8VG21 308 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Siglec12Q91Y57 467 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Errfi1Q99JZ7 461 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Defa-rs10Q64263 91 aa8.46□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Trbv3A0A0A6YYE2 117 aa8.45□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Zfp27P10077 819 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms