RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 INE1O15225 51 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 SSSCA1O60232 199 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 GNG11P61952 73 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 CCL8P80075 99 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 Q0VG73 95 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 PYY3Q5JQD4 70 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 OBSCN-AS1Q96MR7 158 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 CYSTM1Q9H1C7 97 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 NPVFQ9HCQ7 196 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 SCP2D1Q9UJQ7 156 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 AP4S1Q9Y587 144 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 GAPVD1Q14C86 1478 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 NSD3Q9BZ95 1437 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 MED12Q93074 2177 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 MARF1Q9Y4F3 1742 aaKnown RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV3D-7A0A0C4DH55 119 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV2-29A2NJV5 120 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 SIX6O95475 246 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 PCOTHQ58A44 107 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 CYP2G1PQ6ZSU1 146 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 C20orf197Q8N268 126 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 AMELYQ99218 206 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 ADGRB2O60241 1585 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 COL4A4P53420 1690 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 RGPD3A6NKT7 1758 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 DOCK11Q5JSL3 2073 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 TOP2BQ02880 1626 aa1.15□□□□□ -2.22
HMHB1-202ENST00000638299 COL5A1P20908 1838 aaPredicted RBP1.15□□□□□ -2.22
HMHB1-202ENST00000638299 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 PIGBOS1A0A0B4J2F0 54 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 H3BQ15 152 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 M0R2N4 97 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 MRPS14O60783 128 aaKnown RBP1.15□□□□□ -2.23
HMHB1-202ENST00000638299 LINC00032P0C843 101 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD4P59646 89 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP12-1P59990 96 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD3Q14802 87 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 NDUFA11Q86Y39 141 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 CCDC18Q5T9S5 1454 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 MED13Q9UHV7 2174 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ARHGAP35Q9NRY4 1499 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV6-7A0A0A0MS04 114 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV7-1A0A0A6YYK4 115 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CRYM-AS1A6NIL9 109 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 HIGD1CA8MV81 97 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CCL3L1P16619 93 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SEC11AP67812 179 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP5-3Q6L8H2 238 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SFTA2Q6UW10 78 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF818PQ6ZRF7 136 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 C5orf56Q8N8D9 126 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 MYOZ3Q8TDC0 251 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CYP4F30PQ9H0H9 118 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ABCA4P78363 2273 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 PRDM15P57071 1507 aaPredicted RBP1.14□□□□□ -2.23
HMHB1-202ENST00000638299 COL4A6Q14031 1691 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV7-3A0A075B6L6 115 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 IGLV3-32A0A0A0MS00 114 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 FAUP35544 74 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP1-1Q07627 177 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 GDF5OSQ5U4N7 250 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 Q5VV11 94 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 C20orf78Q9BR46 151 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 MANBALQ9NQG1 85 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 KIAA0100Q14667 2235 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 CDK13Q14004 1512 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 SIPA1L3O60292 1781 aaPredicted RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 SCN7AQ01118 1682 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF236Q9UL36 1845 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 UBR1Q8IWV7 1749 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PRRC2BQ5JSZ5 2229 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 KDM6BO15054 1643 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PDCD11Q14690 1871 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PPLO60437 1756 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 A0A087WTM6 91 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 NAP1L6A6NFF2 107 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD1O00168 92 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 APOC3P02656 99 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 NMBP08949 121 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF56Q15929 161 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 DEFB132Q7Z7B7 95 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 COX7B2Q8TF08 81 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 BPESC1Q9GZL8 116 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 COL4A1P02462 1669 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ABCC3O15438 1527 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.11□□□□□ -2.23
HMHB1-202ENST00000638299 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 H3BQF6 201 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms