RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
SOX2-OT-233ENST00000600778 GATCO43716 136 aaKnown RBP7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 CACNG7P62955 275 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 IFITM2Q01629 132 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 TMEM241Q24JQ0 296 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 LINC01551Q86U37 167 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 Q9UF83 564 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 DNAH8Q96JB1 4490 aa7.77□□□□□ -1.17
SOX2-OT-233ENST00000600778 F2Z2F3 143 aa7.76□□□□□ -1.17
SOX2-OT-233ENST00000600778 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
SOX2-OT-233ENST00000600778 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
SOX2-OT-233ENST00000600778 FAT1Q14517 4588 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 XGP55808 180 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 CLLU1Q5K131 121 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 WDR73Q6P4I2 378 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 Q8N3U1 123 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
SOX2-OT-233ENST00000600778 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 GCSHP23434 173 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 CTRLP40313 264 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 RAB4BP61018 213 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 RPL23P62829 140 aaKnown RBP7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 NAT8Q9UHE5 227 aa7.74□□□□□ -1.17
SOX2-OT-233ENST00000600778 A8MWL6 223 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 F5H697 171 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 NTF3P20783 257 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 CT83Q5H943 113 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 ISOC2Q96AB3 205 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 AP1S3Q96PC3 154 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
SOX2-OT-233ENST00000600778 A0A087WWC5 75 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 IGLV5-52A0A0A0MRZ9 124 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 TRBV10-1A0A0K0K1A3 114 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 EPM2AB3EWF7 344 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 LAGE3Q14657 143 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 TWIST1Q15672 202 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 ZNF56Q15929 161 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 Q8N814 137 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 C15orf54Q8N8G6 183 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 TSKUQ8WUA8 353 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
SOX2-OT-233ENST00000600778 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 ADIRFQ15847 76 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 OR10G8Q8NGN5 311 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 PGLYRP4Q96LB8 373 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 V9GYV3 84 aa7.71□□□□□ -1.18
SOX2-OT-233ENST00000600778 TRBV7-3A0A075B6L6 115 aa7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 MGPP08493 103 aa7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 RPL36AP83881 106 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 NTN5Q8WTR8 489 aaPredicted RBP7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 RPL36ALQ969Q0 106 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 URGCP-MRPS24S4R325 110 aa7.7□□□□□ -1.18
SOX2-OT-233ENST00000600778 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 SMR3BP02814 79 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 UBE2D3P61077 147 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 UBE2D2P62837 147 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 HAMPP81172 84 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 SUMO4Q6EEV6 95 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 NIT1Q86X76 327 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 NEXN-AS1Q8NBZ9 246 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 DPH3P1Q9H4G8 78 aa7.69□□□□□ -1.18
SOX2-OT-233ENST00000600778 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 M0QY20 66 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 LECT2O14960 151 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 WFDC2Q14508 124 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 FRZBQ92765 325 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 BORCS7Q96B45 105 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 DNAJC30Q96LL9 226 aa7.68□□□□□ -1.18
SOX2-OT-233ENST00000600778 A0A087WX48 190 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 Q5VSD8 79 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 NUP35Q8NFH5 326 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 NAT8BQ9UHF3 227 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 KLK12Q9UKR0 248 aa7.67□□□□□ -1.18
SOX2-OT-233ENST00000600778 IGKV2D-24A0A075B6R9 120 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 A0A1B0GUT8 65 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 TMEM262E9PQX1 116 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 H7C1H1 209 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 KCNIP4Q6PIL6 250 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 TMEM70Q9BUB7 260 aa7.66□□□□□ -1.18
SOX2-OT-233ENST00000600778 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 SMIM27A0A1W2PRY6 76 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 RIGQ13278 110 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 ELOBQ15370 118 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms