RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GAGE13Q4V321 117 aa7.56□□□□□ -1.2
SMAD4-211ENST00000590499 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 MUC21A0A0G2JKD1 596 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 MUC21A0A140T8X8 626 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 MSRB1Q9NZV6 116 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 PCLOQ9Y6V0 5065 aa7.55□□□□□ -1.2
SMAD4-211ENST00000590499 RBFOX3A6NFN3 312 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 GZMBP10144 247 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
SMAD4-211ENST00000590499 OR10J3Q5JRS4 329 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 SPANXN1Q5VSR9 72 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
SMAD4-211ENST00000590499 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 K7EN84 100 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 P01737 135 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 RAB4BP61018 213 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 UBE2D3P61077 147 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 UBE2D2P62837 147 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 DAZAP1Q96EP5 407 aaKnown RBP7.53□□□□□ -1.2
SMAD4-211ENST00000590499 BIN3Q9NQY0 253 aa7.53□□□□□ -1.2
SMAD4-211ENST00000590499 A0A087WWC5 75 aa7.52□□□□□ -1.21
SMAD4-211ENST00000590499 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
SMAD4-211ENST00000590499 IBA57-AS1B1ANH7 110 aa7.52□□□□□ -1.21
SMAD4-211ENST00000590499 NDUFS6O75380 124 aaKnown RBP7.52□□□□□ -1.21
SMAD4-211ENST00000590499 OCC1Q8TAD7 63 aa7.52□□□□□ -1.21
SMAD4-211ENST00000590499 AP1S3Q96PC3 154 aa7.52□□□□□ -1.21
SMAD4-211ENST00000590499 DNAH8Q96JB1 4490 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 TRBV7-3A0A075B6L6 115 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 CTRLP40313 264 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
SMAD4-211ENST00000590499 ZNF56Q15929 161 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 TOR2AQ5JU69 321 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 NEXN-AS1Q8NBZ9 246 aa7.51□□□□□ -1.21
SMAD4-211ENST00000590499 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
SMAD4-211ENST00000590499 A0A087WTM6 91 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 XKRY2A2RUG3 117 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 F2Z2F3 143 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 ERVFC1-1P60608 527 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 SSTP61278 116 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 CACNG7P62955 275 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 LAGE3Q14657 143 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 FAM210AQ96ND0 272 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
SMAD4-211ENST00000590499 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
SMAD4-211ENST00000590499 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
SMAD4-211ENST00000590499 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
SMAD4-211ENST00000590499 NIT1Q86X76 327 aa7.49□□□□□ -1.21
SMAD4-211ENST00000590499 FAT1Q14517 4588 aa7.49□□□□□ -1.21
SMAD4-211ENST00000590499 LRCOL1A6NCL2 159 aa7.48□□□□□ -1.21
SMAD4-211ENST00000590499 SRP19P09132 144 aaKnown RBP7.48□□□□□ -1.21
SMAD4-211ENST00000590499 SMIM17P0DL12 118 aa7.48□□□□□ -1.21
SMAD4-211ENST00000590499 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
SMAD4-211ENST00000590499 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
SMAD4-211ENST00000590499 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
SMAD4-211ENST00000590499 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
SMAD4-211ENST00000590499 F5H697 171 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 M0QY20 66 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 NTF3P20783 257 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
SMAD4-211ENST00000590499 SMIM7Q9BQ49 75 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 Q9HAA7 133 aa7.47□□□□□ -1.21
SMAD4-211ENST00000590499 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
SMAD4-211ENST00000590499 TRBV6-8A0A0A6YYG3 113 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 MGPP08493 103 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 TRGC1P0CF51 173 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMAD4-211ENST00000590499 CT83Q5H943 113 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 DPH3P1Q9H4G8 78 aa7.46□□□□□ -1.22
SMAD4-211ENST00000590499 GATCO43716 136 aaKnown RBP7.45□□□□□ -1.22
SMAD4-211ENST00000590499 CEBPGP53567 150 aa7.45□□□□□ -1.22
SMAD4-211ENST00000590499 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
SMAD4-211ENST00000590499 DNAJC30Q96LL9 226 aa7.45□□□□□ -1.22
SMAD4-211ENST00000590499 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 ZNF727A8MUV8 499 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 C9JQL5 133 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 H7C1H1 209 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 PSCAO43653 123 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-211ENST00000590499 URGCP-MRPS24S4R325 110 aa7.44□□□□□ -1.22
SMAD4-211ENST00000590499 A8MWL6 223 aa7.43□□□□□ -1.22
SMAD4-211ENST00000590499 WFDC2Q14508 124 aa7.43□□□□□ -1.22
SMAD4-211ENST00000590499 TWIST1Q15672 202 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms