RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 SMIM27A0A1W2PRY6 76 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 GNRH2O43555 120 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 SPINK4O60575 86 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 OR5AL1P0C617 328 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 ARMS2P0C7Q2 107 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 WDR73Q6P4I2 378 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
SMARCD2-208ENST00000580054 IGHV3-16A0A0C4DH30 117 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 A0A1B0GUT8 65 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 H3BVH4 76 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 TRGC1P0CF51 173 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 TCL1AP56279 114 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 ATP5L2Q7Z4Y8 100 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 ZFP82Q8N141 532 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 PGLYRP4Q96LB8 373 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 MRPL16Q9NX20 251 aaKnown RBP6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
SMARCD2-208ENST00000580054 TRAV9-2A0A087WT02 112 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 M0R2P5 195 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 SNAI2O43623 268 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 OXTP01178 125 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 IGLC6P0CF74 106 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 SMIM17P0DL12 118 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 GZMBP10144 247 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 CRYBA4P53673 196 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 TWIST1Q15672 202 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 RASL11AQ6T310 242 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 WFDC10BQ8IUB3 73 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 NUP35Q8NFH5 326 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 TP53TG3Q9ULZ0 132 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
SMARCD2-208ENST00000580054 M0R381 172 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 CIDEAO60543 219 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 CTRLP40313 264 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 SLAQ13239 276 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 FHL2Q14192 279 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 ATRAIDQ6UW56 229 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 Q6ZQT7 251 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 Q6ZSA8 131 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 NEGR1Q7Z3B1 354 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 PTH2Q96A98 100 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 C9orf85Q96MD7 179 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 SSBP4Q9BWG4 385 aaPredicted RBP6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 TNXBP22105 4242 aa6.21□□□□□ -1.42
SMARCD2-208ENST00000580054 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 TRGV4A0A0C4DH28 118 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 A8MWV9 139 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 NTF3P20783 257 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 EVI2AP22794 236 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 SRIP30626 198 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 RAB4BP61018 213 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 HBBP68871 147 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 Q8N814 137 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
SMARCD2-208ENST00000580054 K7EQD1 137 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 MT-ND6P03923 174 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 CAMPP49913 170 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 SSTP61278 116 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 ELOBQ15370 118 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 CBLN2Q8IUK8 224 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
SMARCD2-208ENST00000580054 K7EP13 123 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 RHODO00212 210 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 PSCAO43653 123 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 HLA-DQA1P01909 254 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 CRYGDP07320 174 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 GYPEP15421 78 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 SCXQ7RTU7 201 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 OR10AG1Q8NH19 301 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 RASL10AQ92737 203 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 ZNF479Q96JC4 524 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 DPH3P1Q9H4G8 78 aa6.18□□□□□ -1.42
SMARCD2-208ENST00000580054 TGIF2-C20orf24A0A0A6YYL0 155 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 MUC21A0A0G2JKD1 596 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 MUC21A0A140T8X8 626 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 WFDC2Q14508 124 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 DMRTA1Q5VZB9 504 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 OR4C5Q8NGB2 326 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 GNB1LQ9BYB4 327 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
SMARCD2-208ENST00000580054 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 F5H697 171 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 H7C1H1 209 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 SCO1O75880 301 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 PPP1R17O96001 155 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms