RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SMDT1Q9H4I9 107 aa5.31□□□□□ -1.56
SMG6-211ENST00000572369 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
SMG6-211ENST00000572369 K7EP13 123 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 IGHV3-30P01768 117 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 IGHV3-33P01772 117 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 DNAH10OSP0CZ25 163 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 IGHV3-30-3P0DP02 117 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 IGHV3-30-5P0DP03 117 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 LINC00315P59091 139 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 SRSF3P84103 164 aaKnown RBP5.3□□□□□ -1.56
SMG6-211ENST00000572369 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 KCNIP4Q6PIL6 250 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 C10orf126Q8N4M7 172 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 NEXN-AS1Q8NBZ9 246 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 PGLYRP4Q96LB8 373 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 Q9UF83 564 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 NAT8Q9UHE5 227 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 URGCP-MRPS24S4R325 110 aa5.3□□□□□ -1.56
SMG6-211ENST00000572369 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
SMG6-211ENST00000572369 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
SMG6-211ENST00000572369 CTRLP40313 264 aa5.29□□□□□ -1.56
SMG6-211ENST00000572369 RPL23P62829 140 aaKnown RBP5.29□□□□□ -1.56
SMG6-211ENST00000572369 CT83Q5H943 113 aa5.29□□□□□ -1.56
SMG6-211ENST00000572369 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
SMG6-211ENST00000572369 OSTCQ9NRP0 149 aa5.29□□□□□ -1.56
SMG6-211ENST00000572369 HIGD1CA8MV81 97 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 C9JQL5 133 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 EREGO14944 169 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 PSCAO43653 123 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 LINC00694P0DN24 101 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 UBE2D3P61077 147 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 UBE2D2P62837 147 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 TNP2Q05952 138 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 SUMO4Q6EEV6 95 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 RASL11AQ6T310 242 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 OR10G8Q8NGN5 311 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 ISOC2Q96AB3 205 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 Q9HAA7 133 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 KIF25-AS1Q9Y6Z4 181 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
SMG6-211ENST00000572369 A0A087WX48 190 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 A0A1B0GUT8 65 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 TMEM262E9PQX1 116 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 TMEM97Q5BJF2 176 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 DAZ4Q86SG3 579 aaKnown RBP5.27□□□□□ -1.57
SMG6-211ENST00000572369 DNAJC30Q96LL9 226 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 CNFNQ9BYD5 112 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 GFRA4Q9GZZ7 299 aa5.27□□□□□ -1.57
SMG6-211ENST00000572369 DAZ3Q9NR90 486 aaKnown RBP5.27□□□□□ -1.57
SMG6-211ENST00000572369 TRBV6-8A0A0A6YYG3 113 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 FAM231BA6NCW3 169 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 M0QY20 66 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 FOXA3P55318 350 aaPredicted RBP5.26□□□□□ -1.57
SMG6-211ENST00000572369 RIGQ13278 110 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 CLLU1Q5K131 121 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 NIT2Q9NQR4 276 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 V9GYV3 84 aa5.26□□□□□ -1.57
SMG6-211ENST00000572369 TRBV25-1A0A075B6N4 114 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 TRAV26-2A0A0B4J265 109 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 IBA57-AS1B1ANH7 110 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 PKIAP61925 76 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 ELOBQ15370 118 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 NIT1Q86X76 327 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 Q8N3U1 123 aa5.25□□□□□ -1.57
SMG6-211ENST00000572369 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 TRAV8-3A0A0A6YYJ7 113 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 IGHV1-24A0A0C4DH33 117 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 UBE2L6O14933 153 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 PPP1R2P9O14990 202 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 IFITM2Q01629 132 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 COTL1Q14019 142 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 LAGE3Q14657 143 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 GATD1Q8NB37 220 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 NUP35Q8NFH5 326 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 RMI2Q96E14 147 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 TM2D2Q9BX73 214 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 TMEM191AQ9H0A3 160 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 KLK12Q9UKR0 248 aa5.24□□□□□ -1.57
SMG6-211ENST00000572369 MUC2Q02817 5179 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 SMIM27A0A1W2PRY6 76 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 C16orf90A8MZG2 172 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 J3QL48 77 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 CRPP02741 224 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 ANGP03950 147 aaKnown RBP5.23□□□□□ -1.57
SMG6-211ENST00000572369 AMTP48728 403 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 CAMPP49913 170 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 PNRC1Q12796 327 aaPredicted RBP5.23□□□□□ -1.57
SMG6-211ENST00000572369 GAGE6Q13070 117 aa5.23□□□□□ -1.57
SMG6-211ENST00000572369 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
SMG6-211ENST00000572369 SPATA12Q7Z6I5 190 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms