RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 UBE2AP49459 152 aa4.93□□□□□ -1.62
LINC01043-201ENST00000565936 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
LINC01043-201ENST00000565936 TRAV26-1A0A087WT03 109 aa4.93□□□□□ -1.62
LINC01043-201ENST00000565936 UBE2V1Q13404 147 aa4.93□□□□□ -1.62
LINC01043-201ENST00000565936 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
LINC01043-201ENST00000565936 PRO1854Q9UHT4 67 aa4.93□□□□□ -1.62
LINC01043-201ENST00000565936 IGKV1D-37A0A075B6S9 117 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 COX8AP10176 69 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 SPAG11BQ08648 103 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 UBL5Q9BZL1 73 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 NCOA6Q14686 2063 aaPredicted RBP4.92□□□□□ -1.62
LINC01043-201ENST00000565936 CITED1Q99966 193 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 C16orf95Q9H693 158 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 UTF1Q5T230 341 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 IGLV1-40P01703 118 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 CRYGDP07320 174 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 MDFICQ9P1T7 246 aa4.92□□□□□ -1.62
LINC01043-201ENST00000565936 EIF4EBP1Q13541 118 aaPredicted RBP4.91□□□□□ -1.62
LINC01043-201ENST00000565936 SPANXDQ9BXN6 97 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 NOTCH3Q9UM47 2321 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 TRAV12-1A0A0B4J245 112 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 H0YGX0 51 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 CEND1Q8N111 149 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 ZFAND3Q9H8U3 227 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 PLCE1Q9P212 2302 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 CDSNQ15517 529 aa4.91□□□□□ -1.62
LINC01043-201ENST00000565936 PROP1O75360 226 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 SHANK1Q9Y566 2161 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 TRACP01848 142 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 P0DMU3 169 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 FAM231AP0DMU4 169 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 FAM231CP0DMU5 169 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 B9D2Q9BPU9 175 aa4.9□□□□□ -1.62
LINC01043-201ENST00000565936 FUSP35637 526 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC01043-201ENST00000565936 ORMDL1Q9P0S3 153 aa4.9□□□□□ -1.63
LINC01043-201ENST00000565936 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
LINC01043-201ENST00000565936 Q6ZTI0 123 aa4.9□□□□□ -1.63
LINC01043-201ENST00000565936 GATA1P15976 413 aaPredicted RBP4.9□□□□□ -1.63
LINC01043-201ENST00000565936 GAGE12HA6NDE8 117 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 NUPR2A6NF83 97 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 HAMPP81172 84 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 NDUFS5O43920 106 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 NACAE9PAV3 2078 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 REG3AQ06141 175 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 C19orf71A6NCJ1 209 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 ZNF295-AS1Q8N0V1 137 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 LINC00482Q8N8I6 264 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 C20orf203Q8NBC4 194 aa4.89□□□□□ -1.63
LINC01043-201ENST00000565936 A0A0J9YXV3 536 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 NOTCH2Q04721 2471 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 OPRPNQ99935 248 aaPredicted RBP4.88□□□□□ -1.63
LINC01043-201ENST00000565936 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 NDUFB1O75438 58 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 DEFB1P60022 68 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 DEFB105AQ8NG35 78 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 C7orf33Q8WU49 177 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 PTPN13Q12923 2485 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 CRIP2P52943 208 aaPredicted RBP4.88□□□□□ -1.63
LINC01043-201ENST00000565936 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 CRIP3Q6Q6R5 217 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 hADV29S1A0JD25 119 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 BRI3O95415 125 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 ASPHD1Q5U4P2 390 aa4.88□□□□□ -1.63
LINC01043-201ENST00000565936 RS1O15537 224 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 CRYBA4P53673 196 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 C1orf229Q6ZS94 237 aaPredicted RBP4.87□□□□□ -1.63
LINC01043-201ENST00000565936 ZFAND2AQ8N6M9 145 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 PCNX3Q9H6A9 2034 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 SPG11Q96JI7 2443 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 C9orf118A6NHY6 69 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 PPDPFLQ8WWR9 84 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 BAALCQ8WXS3 180 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 DIRC1Q969H9 104 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 CACNA1AO00555 2505 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 CFC1BP0CG36 223 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 CFC1P0CG37 223 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 IGLC3P0DOY3 106 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 MIAQ16674 131 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 C10orf99Q6UWK7 81 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 SMR3AQ99954 134 aa4.87□□□□□ -1.63
LINC01043-201ENST00000565936 LINC00269Q8N2A0 174 aa4.86□□□□□ -1.63
LINC01043-201ENST00000565936 C20orf173Q96LM9 149 aa4.86□□□□□ -1.63
LINC01043-201ENST00000565936 TINCRA0A1B0GVN0 87 aa4.86□□□□□ -1.63
LINC01043-201ENST00000565936 NHLRC4P0CG21 123 aaPredicted RBP4.86□□□□□ -1.63
LINC01043-201ENST00000565936 RPL39P62891 51 aaKnown RBP4.86□□□□□ -1.63
LINC01043-201ENST00000565936 PIK3CD-AS1Q5SR53 167 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms