RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 ARFGEF1Q9Y6D6 1849 aa0.66□□□□□ -2.3
SCAPER-213ENST00000564757 UBE2D1P51668 147 aa0.66□□□□□ -2.3
SCAPER-213ENST00000564757 ZNF818PQ6ZRF7 136 aa0.66□□□□□ -2.3
SCAPER-213ENST00000564757 GPR98Q8WXG9 6306 aa0.66□□□□□ -2.3
SCAPER-213ENST00000564757 CDK13Q14004 1512 aaKnown RBP0.65□□□□□ -2.31
SCAPER-213ENST00000564757 DOCK11Q5JSL3 2073 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 GVQW2A0A096LPI5 108 aaPredicted RBP0.65□□□□□ -2.31
SCAPER-213ENST00000564757 TRGV1A0A0A0MS02 117 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 RBM3P98179 157 aaKnown RBP0.65□□□□□ -2.31
SCAPER-213ENST00000564757 C12orf73Q69YU5 71 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 VMO1Q7Z5L0 202 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 C1orf54Q8WWF1 131 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 Q96NJ1 140 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 AQP10Q96PS8 301 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 SNRNP25Q9BV90 132 aaKnown RBP0.65□□□□□ -2.31
SCAPER-213ENST00000564757 AGPAT4-IT1Q9H0P7 198 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 RERGLQ9H628 205 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 NAA60Q9H7X0 242 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 LINC00312Q9Y6C7 94 aa0.65□□□□□ -2.31
SCAPER-213ENST00000564757 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 GCHFRP30047 84 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 CCL8P80075 99 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 RPL13AP3Q6NVV1 102 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 NAV2Q8IVL1 2488 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 KCPQ6ZWJ8 1503 aa0.64□□□□□ -2.31
SCAPER-213ENST00000564757 CFTRP13569 1480 aa0.63□□□□□ -2.31
SCAPER-213ENST00000564757 TMEM14DPA8MWL7 114 aa0.63□□□□□ -2.31
SCAPER-213ENST00000564757 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.63□□□□□ -2.31
SCAPER-213ENST00000564757 NWD2Q9ULI1 1742 aa0.63□□□□□ -2.31
SCAPER-213ENST00000564757 TRAV13-2A0A0B4J235 113 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 EFCAB10A6NFE3 127 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 MIF4GDA9UHW6 222 aaKnown RBP0.62□□□□□ -2.31
SCAPER-213ENST00000564757 HCG22E2RYF7 251 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 AKAIN1P0CW23 69 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 SPINK6Q6UWN8 80 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 Q6ZRX8 168 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 PROK2Q9HC23 129 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 KDM6BO15054 1643 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 CADP27708 2225 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 MYH8P13535 1937 aa0.62□□□□□ -2.31
SCAPER-213ENST00000564757 IFT140Q96RY7 1462 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 ROCK2O75116 1388 aaKnown RBP0.61□□□□□ -2.31
SCAPER-213ENST00000564757 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 NMBP08949 121 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 COX6A2Q02221 97 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 Q56UQ5 140 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 C10orf128Q5T292 105 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 Q6AWC8 147 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 BAGE3Q86Y29 109 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 LAMC3Q9Y6N6 1575 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 PHLPP1O60346 1717 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 PIEZO1Q92508 2521 aa0.61□□□□□ -2.31
SCAPER-213ENST00000564757 SNAPC5O75971 98 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 SIX6O95475 246 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 PPP1R17O96001 155 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 APOC2P02655 101 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 PRH1P02810 166 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 FGF7P21781 194 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 INSL4Q14641 139 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 LSM10Q969L4 123 aaKnown RBP0.6□□□□□ -2.31
SCAPER-213ENST00000564757 PPP3R2Q96LZ3 170 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 WFDC6Q9BQY6 131 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 CASKIN1Q8WXD9 1431 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 POLQO75417 2590 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 UBR4Q5T4S7 5183 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 CACNA1AO00555 2505 aa0.6□□□□□ -2.31
SCAPER-213ENST00000564757 CACNA1HO95180 2353 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 ANK2Q01484 3957 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 CLPSL1A2RUU4 121 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 IFNGP01579 166 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 CATR1Q13166 79 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 TTC9CQ8N5M4 171 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 SMR3AQ99954 134 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 NPVFQ9HCQ7 196 aa0.59□□□□□ -2.31
SCAPER-213ENST00000564757 Q8N8P6 123 aa0.58□□□□□ -2.32
SCAPER-213ENST00000564757 R4GMQ9 66 aa0.58□□□□□ -2.32
SCAPER-213ENST00000564757 FOCADQ5VW36 1801 aa0.58□□□□□ -2.32
SCAPER-213ENST00000564757 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
SCAPER-213ENST00000564757 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
SCAPER-213ENST00000564757 TTC28Q96AY4 2481 aa0.58□□□□□ -2.32
SCAPER-213ENST00000564757 LRRC37A3O60309 1634 aa0.57□□□□□ -2.32
SCAPER-213ENST00000564757 BTG2P78543 158 aa0.57□□□□□ -2.32
SCAPER-213ENST00000564757 KTN1Q86UP2 1357 aaKnown RBP0.57□□□□□ -2.32
SCAPER-213ENST00000564757 ZFYVE26Q68DK2 2539 aa0.57□□□□□ -2.32
SCAPER-213ENST00000564757 PCLOQ9Y6V0 5065 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 COL6A3P12111 3177 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 ARAP2Q8WZ64 1704 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 TNCP24821 2201 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 LOC100130705A0A1B0GUX0 176 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 A0A1B0GV90 55 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 UBE2DNLQ8IWF7 75 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 PP6455Q8WZ26 134 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 SSC5DA1L4H1 1573 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 PKD1L2Q7Z442 2459 aa0.56□□□□□ -2.32
SCAPER-213ENST00000564757 MBD5Q9P267 1494 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
SCAPER-213ENST00000564757 CTXND1A0A1B0GTU2 59 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 SPAG11BQ08648 103 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 CFAP126Q5VTH2 177 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms