RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 LINC01551Q86U37 167 aa9.92□□□□□ -0.82
RPUSD1-204ENST00000563560 SMCO4Q9NRQ5 59 aa9.92□□□□□ -0.82
RPUSD1-204ENST00000563560 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 SCO1O75880 301 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 RAB4BP61018 213 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 C10orf126Q8N4M7 172 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 OCC1Q8TAD7 63 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 ANAPC16Q96DE5 110 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 BIN3Q9NQY0 253 aa9.91□□□□□ -0.82
RPUSD1-204ENST00000563560 A0A087WTM6 91 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 LRCOL1A6NCL2 159 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 OR10J3Q5JRS4 329 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 NUDT10Q8NFP7 164 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 OR2D3Q8NGH3 330 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 NUDT11Q96G61 164 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 CNFNQ9BYD5 112 aa9.9□□□□□ -0.82
RPUSD1-204ENST00000563560 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
RPUSD1-204ENST00000563560 FER1L6-AS1Q8NA97 138 aa9.89□□□□□ -0.83
RPUSD1-204ENST00000563560 ISOC2Q96AB3 205 aa9.89□□□□□ -0.83
RPUSD1-204ENST00000563560 TRBV7-3A0A075B6L6 115 aa9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 CDK2AP2O75956 126 aa9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 CTRLP40313 264 aa9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 LAGE3Q14657 143 aa9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 SPANXN1Q5VSR9 72 aa9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 RNASE7Q9H1E1 156 aaKnown RBP9.88□□□□□ -0.83
RPUSD1-204ENST00000563560 P01737 135 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 NIT1Q86X76 327 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 C15orf54Q8N8G6 183 aa9.87□□□□□ -0.83
RPUSD1-204ENST00000563560 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 WDR73Q6P4I2 378 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 NTM-AS1Q6ZSK4 140 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 AP1S3Q96PC3 154 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 IMMP2LQ96T52 175 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
RPUSD1-204ENST00000563560 F2Z2F3 143 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 M0QY20 66 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 S100PP25815 95 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 ZNF56Q15929 161 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 BTF3L4Q96K17 158 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
RPUSD1-204ENST00000563560 VPS13BQ7Z7G8 4022 aa9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 ERVFC1-1P60608 527 aa9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 CACNG7P62955 275 aa9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 KCNIP4Q6PIL6 250 aa9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
RPUSD1-204ENST00000563560 TRBV6-8A0A0A6YYG3 113 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 NTF3P20783 257 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 SSTP61278 116 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 WFDC2Q14508 124 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 PGPEP1Q9NXJ5 209 aa9.83□□□□□ -0.84
RPUSD1-204ENST00000563560 FOXA3P55318 350 aaPredicted RBP9.82□□□□□ -0.84
RPUSD1-204ENST00000563560 CDPF1Q6NVV7 123 aa9.82□□□□□ -0.84
RPUSD1-204ENST00000563560 CHCHD7Q9BUK0 85 aa9.82□□□□□ -0.84
RPUSD1-204ENST00000563560 TRAV9-1A0A075B6T8 112 aa9.81□□□□□ -0.84
RPUSD1-204ENST00000563560 XKRY2A2RUG3 117 aa9.81□□□□□ -0.84
RPUSD1-204ENST00000563560 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
RPUSD1-204ENST00000563560 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
RPUSD1-204ENST00000563560 Q9HAA7 133 aa9.81□□□□□ -0.84
RPUSD1-204ENST00000563560 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
RPUSD1-204ENST00000563560 CT83Q5H943 113 aa9.8□□□□□ -0.84
RPUSD1-204ENST00000563560 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 COLCA2A8K830 154 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 GATCO43716 136 aaKnown RBP9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 ELOBQ15370 118 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 YPEL4Q96NS1 127 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 V9GYV3 84 aa9.79□□□□□ -0.84
RPUSD1-204ENST00000563560 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 F5H697 171 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 TRGC1P0CF51 173 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 XGP55808 180 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 IQCJQ1A5X6 159 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 Q8N814 137 aa9.78□□□□□ -0.84
RPUSD1-204ENST00000563560 MGPP08493 103 aa9.77□□□□□ -0.85
RPUSD1-204ENST00000563560 RASL11AQ6T310 242 aa9.77□□□□□ -0.85
RPUSD1-204ENST00000563560 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
RPUSD1-204ENST00000563560 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms