RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 SPTBN2O15020 2390 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 PLECQ15149 4684 aaKnown RBP-0.35□□□□□ -2.47
NPTN-203ENST00000561898 TRGV1A0A0A0MS02 117 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 NCS1P62166 190 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 CCDC153Q494R4 210 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 SSBP3-AS1Q7Z2R9 100 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 BATF3Q9NR55 127 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 LAMA3Q16787 3333 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 FER1L6Q2WGJ9 1857 aa-0.35□□□□□ -2.47
NPTN-203ENST00000561898 AKAP6Q13023 2319 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 CUBNO60494 3623 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 ZNF815PA8K554 130 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 M0R2P5 195 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 RPL7L1Q6DKI1 246 aaKnown RBP-0.36□□□□□ -2.47
NPTN-203ENST00000561898 SPANXA1Q9NS26 97 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 LSM2Q9Y333 95 aaKnown RBP-0.36□□□□□ -2.47
NPTN-203ENST00000561898 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
NPTN-203ENST00000561898 STAB2Q8WWQ8 2551 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 APOBP04114 4563 aaKnown RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 EP300Q09472 2414 aaPredicted RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 CREBBPQ92793 2442 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 WDR97A6NE52 1622 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 TNS1Q9HBL0 1735 aaKnown RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 A0A0D9SFI3 127 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 GNG14A0A1W2PPG7 69 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 A6NIN4 97 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 DBIP07108 87 aaKnown RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 KRTAP20-2Q3LI61 65 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 CYP4F30PQ9H0H9 118 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 NDUFA12Q9UI09 145 aa-0.37□□□□□ -2.47
NPTN-203ENST00000561898 SETD2Q9BYW2 2564 aaPredicted RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 PRRC2CQ9Y520 2896 aaKnown RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 TNRC18O15417 2968 aaPredicted RBP-0.37□□□□□ -2.47
NPTN-203ENST00000561898 SACSQ9NZJ4 4579 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 USP9YO00507 2555 aaPredicted RBP-0.38□□□□□ -2.47
NPTN-203ENST00000561898 HELZP42694 1942 aaKnown RBP-0.38□□□□□ -2.47
NPTN-203ENST00000561898 DNAH11Q96DT5 4516 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 PTPRQQ9UMZ3 2332 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 EDDM3BP56851 147 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 LINC01545Q5VT33 79 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 MMGT1Q8N4V1 131 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 PRO0255Q9UI72 69 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 ABCA13Q86UQ4 5058 aa-0.38□□□□□ -2.47
NPTN-203ENST00000561898 VIRMAQ69YN4 1812 aaKnown RBP-0.38□□□□□ -2.47
NPTN-203ENST00000561898 MXRA5Q9NR99 2828 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 SSC5DA1L4H1 1573 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 APC2O95996 2303 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 TRBV20-1A0A075B6N2 111 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 H0YJX3 145 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 M0R3E3 92 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 SAR1AQ9NR31 198 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 RPRMQ9NS64 109 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 MYH1P12882 1939 aa-0.39□□□□□ -2.47
NPTN-203ENST00000561898 DYNC1H1Q14204 4646 aaKnown RBP-0.39□□□□□ -2.47
NPTN-203ENST00000561898 PBRM1Q86U86 1689 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 PTPRMP28827 1452 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 ACANP16112 2415 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 SPINK8P0C7L1 97 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 SMIM6P0DI80 62 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 KRTAP19-8Q3LI54 63 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 SPANXN1Q5VSR9 72 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 NIPBLQ6KC79 2804 aaeCLIP-0.4□□□□□ -2.47
NPTN-203ENST00000561898 SMG1Q96Q15 3661 aaKnown RBP-0.4□□□□□ -2.47
NPTN-203ENST00000561898 KDM5CP41229 1560 aa-0.4□□□□□ -2.47
NPTN-203ENST00000561898 ITPR3Q14573 2671 aa-0.41□□□□□ -2.47
NPTN-203ENST00000561898 EPG5Q9HCE0 2579 aa-0.41□□□□□ -2.47
NPTN-203ENST00000561898 VWFP04275 2813 aa-0.41□□□□□ -2.47
NPTN-203ENST00000561898 A0A0C4DFX4 3053 aa-0.41□□□□□ -2.47
NPTN-203ENST00000561898 MAP1BP46821 2468 aaKnown RBP-0.41□□□□□ -2.47
NPTN-203ENST00000561898 FAM92AA1XBS5 289 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 NBEAP1P0C6P0 100 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 PIRTP0C851 137 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 DEFB109BQ30KR1 87 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 CTAGE3PQ8IX95 158 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 VSTM2AQ8TAG5 236 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 CNFNQ9BYD5 112 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 DNAH17Q9UFH2 4485 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 CHD6Q8TD26 2715 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 MAP2P11137 1827 aaKnown RBP-0.41□□□□□ -2.48
NPTN-203ENST00000561898 ERCC6Q03468 1493 aa-0.41□□□□□ -2.48
NPTN-203ENST00000561898 FLNBO75369 2602 aaKnown RBP-0.42□□□□□ -2.48
NPTN-203ENST00000561898 DNAH5Q8TE73 4624 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 TRAV1-2A0A0B4J238 106 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 TRBV10-3A0A0K0K1G6 114 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 WFDC2Q14508 124 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 C9orf116Q5BN46 136 aaPredicted RBP-0.42□□□□□ -2.48
NPTN-203ENST00000561898 MIC13Q5XKP0 118 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 MRPL40Q9NQ50 206 aaKnown RBP-0.42□□□□□ -2.48
NPTN-203ENST00000561898 PIEZO2Q9H5I5 2752 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 DOCK11Q5JSL3 2073 aa-0.42□□□□□ -2.48
NPTN-203ENST00000561898 WDR87Q6ZQQ6 2873 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 KALRNO60229 2985 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 WNK1Q9H4A3 2382 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 M0R129 80 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 PIN1P1O15428 100 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 IFNA17P01571 189 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 MT4P47944 62 aa-0.43□□□□□ -2.48
NPTN-203ENST00000561898 AIF1LQ9BQI0 150 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms