RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
NPTN-203ENST00000561898 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
NPTN-203ENST00000561898 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
NPTN-203ENST00000561898 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
NPTN-203ENST00000561898 FOXD1Q16676 465 aa20.47■□□□□ 0.87
NPTN-203ENST00000561898 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
NPTN-203ENST00000561898 MSH5O43196 834 aa19.43■□□□□ 0.7
NPTN-203ENST00000561898 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
NPTN-203ENST00000561898 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
NPTN-203ENST00000561898 ADRA2BP18089 450 aa18.41■□□□□ 0.54
NPTN-203ENST00000561898 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
NPTN-203ENST00000561898 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
NPTN-203ENST00000561898 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
NPTN-203ENST00000561898 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
NPTN-203ENST00000561898 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
NPTN-203ENST00000561898 RNF39Q9H2S5 420 aa16.54■□□□□ 0.24
NPTN-203ENST00000561898 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
NPTN-203ENST00000561898 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
NPTN-203ENST00000561898 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
NPTN-203ENST00000561898 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
NPTN-203ENST00000561898 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
NPTN-203ENST00000561898 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
NPTN-203ENST00000561898 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
NPTN-203ENST00000561898 POTEHQ6S545 545 aa15.74■□□□□ 0.11
NPTN-203ENST00000561898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPTN-203ENST00000561898 DSG3P32926 999 aa15.21■□□□□ 0.03
NPTN-203ENST00000561898 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
NPTN-203ENST00000561898 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
NPTN-203ENST00000561898 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
NPTN-203ENST00000561898 CAPN15O75808 1086 aa15.05■□□□□ -0
NPTN-203ENST00000561898 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
NPTN-203ENST00000561898 ABCB7O75027 752 aa14.64□□□□□ -0.07
NPTN-203ENST00000561898 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
NPTN-203ENST00000561898 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
NPTN-203ENST00000561898 APLP2Q06481 763 aa14.53□□□□□ -0.08
NPTN-203ENST00000561898 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
NPTN-203ENST00000561898 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
NPTN-203ENST00000561898 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
NPTN-203ENST00000561898 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
NPTN-203ENST00000561898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
NPTN-203ENST00000561898 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
NPTN-203ENST00000561898 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
NPTN-203ENST00000561898 POLA2Q14181 598 aa14.09□□□□□ -0.15
NPTN-203ENST00000561898 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
NPTN-203ENST00000561898 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
NPTN-203ENST00000561898 KCNA4P22459 653 aa13.94□□□□□ -0.18
NPTN-203ENST00000561898 HAX1O00165 279 aa13.92□□□□□ -0.18
NPTN-203ENST00000561898 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
NPTN-203ENST00000561898 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
NPTN-203ENST00000561898 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
NPTN-203ENST00000561898 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
NPTN-203ENST00000561898 EVX2Q03828 476 aa13.75□□□□□ -0.21
NPTN-203ENST00000561898 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
NPTN-203ENST00000561898 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
NPTN-203ENST00000561898 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
NPTN-203ENST00000561898 LHX8Q68G74 356 aa13.48□□□□□ -0.25
NPTN-203ENST00000561898 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
NPTN-203ENST00000561898 GABBR2O75899 941 aa13.38□□□□□ -0.27
NPTN-203ENST00000561898 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
NPTN-203ENST00000561898 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.29
NPTN-203ENST00000561898 SPDYE6P0CI01 402 aa13.27□□□□□ -0.29
NPTN-203ENST00000561898 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
NPTN-203ENST00000561898 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
NPTN-203ENST00000561898 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
NPTN-203ENST00000561898 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
NPTN-203ENST00000561898 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
NPTN-203ENST00000561898 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
NPTN-203ENST00000561898 FBLN2P98095 1184 aa13.05□□□□□ -0.32
NPTN-203ENST00000561898 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
NPTN-203ENST00000561898 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
NPTN-203ENST00000561898 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
NPTN-203ENST00000561898 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
NPTN-203ENST00000561898 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
NPTN-203ENST00000561898 CLCN6P51797 869 aa12.92□□□□□ -0.34
NPTN-203ENST00000561898 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
NPTN-203ENST00000561898 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
NPTN-203ENST00000561898 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
NPTN-203ENST00000561898 ZBTB22O15209 634 aa12.84□□□□□ -0.35
NPTN-203ENST00000561898 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
NPTN-203ENST00000561898 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
NPTN-203ENST00000561898 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
NPTN-203ENST00000561898 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPTN-203ENST00000561898 POTEMA6NI47 508 aa12.72□□□□□ -0.37
NPTN-203ENST00000561898 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
NPTN-203ENST00000561898 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
NPTN-203ENST00000561898 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
NPTN-203ENST00000561898 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
NPTN-203ENST00000561898 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
NPTN-203ENST00000561898 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
NPTN-203ENST00000561898 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
NPTN-203ENST00000561898 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
NPTN-203ENST00000561898 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
NPTN-203ENST00000561898 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
NPTN-203ENST00000561898 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
NPTN-203ENST00000561898 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
NPTN-203ENST00000561898 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
NPTN-203ENST00000561898 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
NPTN-203ENST00000561898 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
NPTN-203ENST00000561898 C7P10643 843 aa12.27□□□□□ -0.45
NPTN-203ENST00000561898 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 262.2 ms