RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 DEFB104AQ8WTQ1 72 aa8.36□□□□□ -1.07
CHRNA3-208ENST00000561128 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
CHRNA3-208ENST00000561128 AP1S3Q96PC3 154 aa8.36□□□□□ -1.07
CHRNA3-208ENST00000561128 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
CHRNA3-208ENST00000561128 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 F5H697 171 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 TEX46H3BTG2 121 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 M0QY20 66 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 P01737 135 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 CTRLP40313 264 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 OCC1Q8TAD7 63 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 SMIM12Q96EX1 92 aa8.35□□□□□ -1.07
CHRNA3-208ENST00000561128 GCSHP23434 173 aa8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 TOR2AQ5JU69 321 aa8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 Q8N976 141 aa8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 DAZAP1Q96EP5 407 aaKnown RBP8.34□□□□□ -1.07
CHRNA3-208ENST00000561128 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
CHRNA3-208ENST00000561128 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
CHRNA3-208ENST00000561128 RPS20P60866 119 aaKnown RBP8.33□□□□□ -1.08
CHRNA3-208ENST00000561128 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
CHRNA3-208ENST00000561128 RPP21Q9H633 154 aaKnown RBP8.33□□□□□ -1.08
CHRNA3-208ENST00000561128 IGKV2D-24A0A075B6R9 120 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 NTF3P20783 257 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 ATRAIDQ6UW56 229 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 CLPSL2Q6UWE3 100 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
CHRNA3-208ENST00000561128 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 CEBPGP53567 150 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 CACNG7P62955 275 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 GAGE6Q13070 117 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 GFRA4Q9GZZ7 299 aa8.31□□□□□ -1.08
CHRNA3-208ENST00000561128 A0A087WX48 190 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 C9JQL5 133 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 BLOC1S1P78537 153 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 URGCP-MRPS24S4R325 110 aa8.3□□□□□ -1.08
CHRNA3-208ENST00000561128 TMEM262E9PQX1 116 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 RBX1P62877 108 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 Q5VSD8 79 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
CHRNA3-208ENST00000561128 F2Z2F3 143 aa8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 SRSF3P84103 164 aaKnown RBP8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 IQCJQ1A5X6 159 aa8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 Q6ZSA8 131 aa8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 FAM210AQ96ND0 272 aa8.28□□□□□ -1.08
CHRNA3-208ENST00000561128 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 XKRY2A2RUG3 117 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 EPM2AB3EWF7 344 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 TWIST1Q15672 202 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 LINC01551Q86U37 167 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 C20orf203Q8NBC4 194 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 TMEM70Q9BUB7 260 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
CHRNA3-208ENST00000561128 GATCO43716 136 aaKnown RBP8.26□□□□□ -1.09
CHRNA3-208ENST00000561128 FAM231DQ6ZW35 169 aa8.26□□□□□ -1.09
CHRNA3-208ENST00000561128 LINC00269Q8N2A0 174 aa8.26□□□□□ -1.09
CHRNA3-208ENST00000561128 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
CHRNA3-208ENST00000561128 FAT1Q14517 4588 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 HLA-DQA1P01909 254 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 WDR73Q6P4I2 378 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 EIF5A2Q9GZV4 153 aaKnown RBP8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 NIT2Q9NQR4 276 aa8.25□□□□□ -1.09
CHRNA3-208ENST00000561128 IGLV10-54A0A075B6I4 117 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 H7C1H1 209 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 CRPP02741 224 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 ELOBQ15370 118 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 RMI2Q96E14 147 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
CHRNA3-208ENST00000561128 ZNF727A8MUV8 499 aa8.23□□□□□ -1.09
CHRNA3-208ENST00000561128 Q0VG73 95 aa8.23□□□□□ -1.09
CHRNA3-208ENST00000561128 KCNIP4Q6PIL6 250 aa8.23□□□□□ -1.09
CHRNA3-208ENST00000561128 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
CHRNA3-208ENST00000561128 TMEM243Q9BU79 118 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms