RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SSTP61278 116 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 ZNF56Q15929 161 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 NDUFA5Q16718 116 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 TMEM97Q5BJF2 176 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 LYZL1Q6UWQ5 148 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 MSRB1Q9NZV6 116 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 KIF25-AS1Q9Y6Z4 181 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 DYNC1H1Q14204 4646 aaKnown RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 IBA57-AS1B1ANH7 110 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 K7EN84 100 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 SRP19P09132 144 aaKnown RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 UBE2D3P61077 147 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 UBE2D2P62837 147 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 TMEM241Q24JQ0 296 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 CT83Q5H943 113 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 CLLU1Q5K131 121 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 SMIM15Q7Z3B0 74 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 DAZ4Q86SG3 579 aaKnown RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 DNAJC30Q96LL9 226 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 RNASE7Q9H1E1 156 aaKnown RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 DAZ3Q9NR90 486 aaKnown RBP5.75□□□□□ -1.49
TPM1-213ENST00000558400 URGCP-MRPS24S4R325 110 aa5.75□□□□□ -1.49
TPM1-213ENST00000558400 HERC1Q15751 4861 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 FAM231BA6NCW3 169 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 CTRLP40313 264 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 PKIAP61925 76 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 ELOBQ15370 118 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 TWIST1Q15672 202 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 KCNIP4Q6PIL6 250 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 LINC01551Q86U37 167 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 C15orf54Q8N8G6 183 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 FRZBQ92765 325 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 BORCS7Q96B45 105 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 GFRA4Q9GZZ7 299 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 OSTCQ9NRP0 149 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 Q9UF83 564 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
TPM1-213ENST00000558400 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 TRAV8-3A0A0A6YYJ7 113 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 M0QY20 66 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 LAGE3Q14657 143 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 Q6ZRN7 208 aaPredicted RBP5.73□□□□□ -1.49
TPM1-213ENST00000558400 COX11Q9Y6N1 276 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 DNAH11Q96DT5 4516 aa5.73□□□□□ -1.49
TPM1-213ENST00000558400 A0A087WX48 190 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 TRBV6-8A0A0A6YYG3 113 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 LINC00862A6NCI5 91 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 PSCAO43653 123 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 IGHV3-30P01768 117 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 IGHV3-33P01772 117 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 MGPP08493 103 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 IGHV3-30-3P0DP02 117 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 IGHV3-30-5P0DP03 117 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 RASL11AQ6T310 242 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 NIT1Q86X76 327 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 TSKUQ8WUA8 353 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 GTSF1Q8WW33 167 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 NIT2Q9NQR4 276 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 NAT8Q9UHE5 227 aa5.72□□□□□ -1.49
TPM1-213ENST00000558400 TMEM262E9PQX1 116 aa5.71□□□□□ -1.5
TPM1-213ENST00000558400 RMI2Q96E14 147 aa5.71□□□□□ -1.5
TPM1-213ENST00000558400 HSPG2P98160 4391 aa5.71□□□□□ -1.5
TPM1-213ENST00000558400 FAT2Q9NYQ8 4349 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 TRBV25-1A0A075B6N4 114 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 A0A1B0GUT8 65 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 HIGD1CA8MV81 97 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
TPM1-213ENST00000558400 Q0VG73 95 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 SUMO4Q6EEV6 95 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 CDPF1Q6NVV7 123 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 SPATA12Q7Z6I5 190 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 ISOC2Q96AB3 205 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 PGLYRP4Q96LB8 373 aa5.7□□□□□ -1.5
TPM1-213ENST00000558400 A0A087WTM6 91 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
TPM1-213ENST00000558400 C9JQL5 133 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 RIGQ13278 110 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 ADIRFQ15847 76 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 CHCHD5Q9BSY4 110 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 Q9HAA7 133 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 NAT8BQ9UHF3 227 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 V9GYV3 84 aa5.69□□□□□ -1.5
TPM1-213ENST00000558400 IGHV1-24A0A0C4DH33 117 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 S100A1P23297 94 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
TPM1-213ENST00000558400 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 TMEM191AQ9H0A3 160 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
TPM1-213ENST00000558400 A0A1B0GW15 77 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms