RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 GTSF1Q8WW33 167 aa5.89□□□□□ -1.47
ACTN1-213ENST00000554508 SAMD10Q9BYL1 202 aa5.89□□□□□ -1.47
ACTN1-213ENST00000554508 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
ACTN1-213ENST00000554508 JPT2Q9H910 190 aa5.89□□□□□ -1.47
ACTN1-213ENST00000554508 A0A087WTM6 91 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 A0A087WWC5 75 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 A0A087WWL8 130 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 LINC00694P0DN24 101 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 ADCYAP1P18509 176 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 GAGE1Q13065 139 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 GAGE4Q13068 117 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 GAGE5Q13069 117 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 TWIST1Q15672 202 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 C14orf178Q8N769 122 aaPredicted RBP5.88□□□□□ -1.47
ACTN1-213ENST00000554508 TSKUQ8WUA8 353 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 BORCS7Q96B45 105 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 SEC11CQ9BY50 192 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 V9GYV3 84 aa5.88□□□□□ -1.47
ACTN1-213ENST00000554508 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 PPP1R2P9O14990 202 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 PSCAO43653 123 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 APOC3P02656 99 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 MT-ND4LP03901 98 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 NTF3P20783 257 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 CTRLP40313 264 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 LAGE3Q14657 143 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 AP1S3Q96PC3 154 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
ACTN1-213ENST00000554508 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 FAM231BA6NCW3 169 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 F5H697 171 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 SNAPINO95295 136 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 IGHV3-33P01772 117 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 IGHV3-30-3P0DP02 117 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 ZNF56Q15929 161 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 WDR73Q6P4I2 378 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 SVBPQ8N300 66 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 ANAPC16Q96DE5 110 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
ACTN1-213ENST00000554508 TRAV8-3A0A0A6YYJ7 113 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 MGPP08493 103 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 TRGC1P0CF51 173 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 FOXA3P55318 350 aaPredicted RBP5.85□□□□□ -1.47
ACTN1-213ENST00000554508 RAB4BP61018 213 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 RPL36AP83881 106 aaKnown RBP5.85□□□□□ -1.47
ACTN1-213ENST00000554508 SMIM15Q7Z3B0 74 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 MAPKAPK5-AS1Q8N8E1 139 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 NUP35Q8NFH5 326 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 RPL36ALQ969Q0 106 aaKnown RBP5.85□□□□□ -1.47
ACTN1-213ENST00000554508 TM2D2Q9BX73 214 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 Q9UF83 564 aa5.85□□□□□ -1.47
ACTN1-213ENST00000554508 TRBV7-3A0A075B6L6 115 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 LRCOL1A6NCL2 159 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 C10orf91Q5T1B1 145 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 Q8N1X5 172 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
ACTN1-213ENST00000554508 CNFNQ9BYD5 112 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 Q9HAA7 133 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 CARHSP1Q9Y2V2 147 aaKnown RBP5.84□□□□□ -1.47
ACTN1-213ENST00000554508 URGCP-MRPS24S4R325 110 aa5.84□□□□□ -1.47
ACTN1-213ENST00000554508 UBE2D3P61077 147 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 UBE2D2P62837 147 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 RIGQ13278 110 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 NIT1Q86X76 327 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.83□□□□□ -1.48
ACTN1-213ENST00000554508 CLRN3Q8NCR9 226 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 CHCHD7Q9BUK0 85 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 DPH3P1Q9H4G8 78 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 COX11Q9Y6N1 276 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 KIF25-AS1Q9Y6Z4 181 aa5.83□□□□□ -1.48
ACTN1-213ENST00000554508 C7orf77A4D0Y5 90 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 GCSHP23434 173 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.48
ACTN1-213ENST00000554508 CAMPP49913 170 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 ELOBQ15370 118 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 MRPL54Q6P161 138 aaKnown RBP5.82□□□□□ -1.48
ACTN1-213ENST00000554508 KCNIP4Q6PIL6 250 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
ACTN1-213ENST00000554508 RMI2Q96E14 147 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 CTDSP1Q9GZU7 261 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 RPS10P5Q9NQ39 176 aa5.82□□□□□ -1.48
ACTN1-213ENST00000554508 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
ACTN1-213ENST00000554508 A0A087WX48 190 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 IGLV5-52A0A0A0MRZ9 124 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 H7C1H1 209 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 RHEBQ15382 184 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 TMEM97Q5BJF2 176 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 SUMO4Q6EEV6 95 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 Q8N3U1 123 aa5.81□□□□□ -1.48
ACTN1-213ENST00000554508 Q8N814 137 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms