RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	MUC22	E2RYF6	1773 aa	Predicted RBP	-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	APC2	O95996	2303 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	FAM236A	A0A1B0GUQ0	79 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	FAM236B	A0A1B0GV22	79 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	IGLC6	P0CF74	106 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	HIST1H1A	Q02539	215 aa	Predicted RBP	-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	SPANXN1	Q5VSR9	72 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	BATF3	Q9NR55	127 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	DCHS2	Q6V1P9	2916 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	NBEAL1	Q6ZS30	2694 aa		-0.42	□□□□□ -2.48
RAP1B-231	ENST00000544639	PCLO	Q9Y6V0	5065 aa		-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639	KMT2C	Q8NEZ4	4911 aa	Known RBP	-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639		M0R129	80 aa		-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639	PIRT	P0C851	137 aa		-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639	SCP2D1	Q9UJQ7	156 aa		-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639	ARFGEF1	Q9Y6D6	1849 aa		-0.43	□□□□□ -2.48
RAP1B-231	ENST00000544639	DOPEY2	Q9Y3R5	2298 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	MAP1A	P78559	2803 aa	Predicted RBP	-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	PKD1L1	Q8TDX9	2849 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	OVOS2	A0A0J9YW53	1432 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	OVOS2	Q6IE36	1432 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	EDDM3B	P56851	147 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	C9orf116	Q5BN46	136 aa	Predicted RBP	-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	NEB	P20929	6669 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	MYH6	P13533	1939 aa		-0.44	□□□□□ -2.48
RAP1B-231	ENST00000544639	C2CD3	Q4AC94	2353 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	HECTD4	Q9Y4D8	3996 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	CHD6	Q8TD26	2715 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	GOLGA3	Q08378	1498 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	PITX3	O75364	302 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	PRM1	P04553	51 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	SSBP3-AS1	Q7Z2R9	100 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	UBE2DNL	Q8IWF7	75 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	PYDC1	Q8WXC3	89 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	STAB2	Q8WWQ8	2551 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	COL6A3	P12111	3177 aa		-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	IBTK	Q9P2D0	1353 aa	Predicted RBP	-0.45	□□□□□ -2.48
RAP1B-231	ENST00000544639	ALMS1	Q8TCU4	4167 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	DISP2	A7MBM2	1401 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	ACAN	P16112	2415 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	MAP1B	P46821	2468 aa	Known RBP	-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	ZNF815P	A8K554	130 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	TSPAN19	P0C672	248 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	DEFB109B	Q30KR1	87 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	KRTAP19-8	Q3LI54	63 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	C10orf82	Q8WW14	230 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	WFDC6	Q9BQY6	131 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	RPRM	Q9NS64	109 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	NF1	P21359	2839 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	ANKRD30A	Q9BXX3	1397 aa		-0.46	□□□□□ -2.48
RAP1B-231	ENST00000544639	PIEZO2	Q9H5I5	2752 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	CLPSL1	A2RUU4	121 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639		G3V318	75 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	LINC00694	P0DN24	101 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	UBE2D1	P51668	147 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	CKS1B	P61024	79 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	SPAG11B	Q08648	103 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	CYP4F30P	Q9H0H9	118 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	PKDREJ	Q9NTG1	2253 aa		-0.47	□□□□□ -2.48
RAP1B-231	ENST00000544639	FLNB	O75369	2602 aa	Known RBP	-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	SPRR2B	P35325	72 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	UBE2G1	P62253	170 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	DR1	Q01658	176 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	AKAP14	Q86UN6	197 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	SMIM3	Q9BZL3	60 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639	LRP1B	Q9NZR2	4599 aa		-0.48	□□□□□ -2.49
RAP1B-231	ENST00000544639		M0R3E3	92 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	WFDC2	Q14508	124 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	KRTAP20-2	Q3LI61	65 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	RPL7L1	Q6DKI1	246 aa	Known RBP	-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	CTAGE3P	Q8IX95	158 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	ARHGEF10	O15013	1369 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	LAMA5	O15230	3695 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	ADGRB1	O14514	1584 aa		-0.49	□□□□□ -2.49
RAP1B-231	ENST00000544639	SIPA1L3	O60292	1781 aa	Predicted RBP	-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	FAT1	Q14517	4588 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	TRBV10-3	A0A0K0K1G6	114 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639		A6NIN4	97 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639		J3QR89	54 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	NCR2	O95944	276 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	IFNA17	P01571	189 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639		Q6ZUT4	128 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	GSKIP	Q9P0R6	139 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	PRO0255	Q9UI72	69 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	ZMYM4	Q5VZL5	1548 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	PLCE1	Q9P212	2302 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	HERC2	O95714	4834 aa		-0.5	□□□□□ -2.49
RAP1B-231	ENST00000544639	TRAV1-2	A0A0B4J238	106 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639	ARPC5	O15511	151 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639	NHSL1	Q5SYE7	1610 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639		Q5VV11	94 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639		Q8IZM0	81 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639	PRG4	Q92954	1404 aa	Predicted RBP	-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639	CNFN	Q9BYD5	112 aa		-0.51	□□□□□ -2.49
RAP1B-231	ENST00000544639	MYH9	P35579	1960 aa	Known RBP	-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	TMEM2	Q9UHN6	1383 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	BSN	Q9UPA5	3926 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639		A0A0D9SFI3	127 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639		M0R2Z0	102 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	PSMG3	Q9BT73	122 aa	Predicted RBP	-0.52	□□□□□ -2.49

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