RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 Q9UF83 564 aa12.29□□□□□ -0.44
CCDC61-201ENST00000536603 DNAH11Q96DT5 4516 aa12.29□□□□□ -0.44
CCDC61-201ENST00000536603 GAGE12JA6NER3 117 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 F2Z2F3 143 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 GAGE1Q13065 139 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 GAGE4Q13068 117 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 GAGE5Q13069 117 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 NAT8BQ9UHF3 227 aa12.28□□□□□ -0.44
CCDC61-201ENST00000536603 TTC32Q5I0X7 151 aa12.27□□□□□ -0.45
CCDC61-201ENST00000536603 ATP6V0E2Q8NHE4 81 aa12.27□□□□□ -0.45
CCDC61-201ENST00000536603 KRTAP1-5Q9BYS1 174 aa12.27□□□□□ -0.45
CCDC61-201ENST00000536603 NTF3P20783 257 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 CACNG7P62955 275 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 WFDC10BQ8IUB3 73 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 C6orf223Q8N319 242 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
CCDC61-201ENST00000536603 TIRAPP58753 221 aa12.25□□□□□ -0.45
CCDC61-201ENST00000536603 ZNF56Q15929 161 aa12.25□□□□□ -0.45
CCDC61-201ENST00000536603 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 RAB4BP61018 213 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 TWIST1Q15672 202 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 IMMP2LQ96T52 175 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 KIF25-AS1Q9Y6Z4 181 aa12.24□□□□□ -0.45
CCDC61-201ENST00000536603 F5H697 171 aa12.23□□□□□ -0.45
CCDC61-201ENST00000536603 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
CCDC61-201ENST00000536603 LINC00315P59091 139 aa12.23□□□□□ -0.45
CCDC61-201ENST00000536603 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
CCDC61-201ENST00000536603 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
CCDC61-201ENST00000536603 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
CCDC61-201ENST00000536603 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
CCDC61-201ENST00000536603 EVI2AP22794 236 aa12.22□□□□□ -0.45
CCDC61-201ENST00000536603 OR10J3Q5JRS4 329 aa12.22□□□□□ -0.45
CCDC61-201ENST00000536603 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
CCDC61-201ENST00000536603 LELP1Q5T871 98 aa12.21□□□□□ -0.45
CCDC61-201ENST00000536603 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.45
CCDC61-201ENST00000536603 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
CCDC61-201ENST00000536603 SCO1O75880 301 aa12.2□□□□□ -0.46
CCDC61-201ENST00000536603 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
CCDC61-201ENST00000536603 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
CCDC61-201ENST00000536603 RIGQ13278 110 aa12.2□□□□□ -0.46
CCDC61-201ENST00000536603 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
CCDC61-201ENST00000536603 YPEL4Q96NS1 127 aa12.2□□□□□ -0.46
CCDC61-201ENST00000536603 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 MGPP08493 103 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 Q8N1X5 172 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 BTF3L4Q96K17 158 aa12.19□□□□□ -0.46
CCDC61-201ENST00000536603 CAMPP49913 170 aa12.18□□□□□ -0.46
CCDC61-201ENST00000536603 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
CCDC61-201ENST00000536603 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
CCDC61-201ENST00000536603 S100A1P23297 94 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 UBE2D3P61077 147 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 UBE2D2P62837 147 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 ELOBQ15370 118 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 HSPG2P98160 4391 aa12.17□□□□□ -0.46
CCDC61-201ENST00000536603 TRAV9-1A0A075B6T8 112 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 S100PP25815 95 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 HBBP68871 147 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 DPH3P1Q9H4G8 78 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 SMCO4Q9NRQ5 59 aa12.16□□□□□ -0.46
CCDC61-201ENST00000536603 K7EP13 123 aa12.15□□□□□ -0.46
CCDC61-201ENST00000536603 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
CCDC61-201ENST00000536603 AMN1Q8IY45 258 aa12.15□□□□□ -0.46
CCDC61-201ENST00000536603 A0A1B0GW15 77 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 M0QY20 66 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
CCDC61-201ENST00000536603 H7C1H1 209 aa12.13□□□□□ -0.47
CCDC61-201ENST00000536603 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 RAB4AP20338 218 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 FAM104BQ5XKR9 115 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 TMEM136Q6ZRR5 245 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 SMIM15Q7Z3B0 74 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 Q8N3U1 123 aa12.12□□□□□ -0.47
CCDC61-201ENST00000536603 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.12□□□□□ -0.47
CCDC61-201ENST00000536603 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
CCDC61-201ENST00000536603 Q6ZRN7 208 aaPredicted RBP12.11□□□□□ -0.47
CCDC61-201ENST00000536603 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms