RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GAS8-AS1O95177 125 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 S100A9P06702 114 aaKnown RBP6.32□□□□□ -1.4
SSBP3-215ENST00000533946 RAB4BP61018 213 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 Q5VSD8 79 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 SLC51BQ86UW2 128 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 OR10G8Q8NGN5 311 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 GFRA4Q9GZZ7 299 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 M0QY20 66 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 EREGO14944 169 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 MGPP08493 103 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 CXCL1P09341 107 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 GNG4P50150 75 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 EIF5AP63241 154 aaKnown RBP6.31□□□□□ -1.4
SSBP3-215ENST00000533946 GAGE6Q13070 117 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 ATRAIDQ6UW56 229 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 AKAP14Q86UN6 197 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 FER1L6-AS1Q8NA97 138 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 GTSF1Q8WW33 167 aa6.31□□□□□ -1.4
SSBP3-215ENST00000533946 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 TRAV26-2A0A0B4J265 109 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 K7EP13 123 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 NTF3P20783 257 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 RAB5CP51148 216 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
SSBP3-215ENST00000533946 CDPF1Q6NVV7 123 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
SSBP3-215ENST00000533946 VAX2Q9UIW0 290 aa6.3□□□□□ -1.4
SSBP3-215ENST00000533946 A0A087WWC5 75 aa6.29□□□□□ -1.4
SSBP3-215ENST00000533946 TRBV10-1A0A0K0K1A3 114 aa6.29□□□□□ -1.4
SSBP3-215ENST00000533946 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
SSBP3-215ENST00000533946 C9JQL5 133 aa6.29□□□□□ -1.4
SSBP3-215ENST00000533946 LAGE3Q14657 143 aa6.29□□□□□ -1.4
SSBP3-215ENST00000533946 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
SSBP3-215ENST00000533946 P01737 135 aa6.28□□□□□ -1.4
SSBP3-215ENST00000533946 RBX1P62877 108 aa6.28□□□□□ -1.4
SSBP3-215ENST00000533946 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
SSBP3-215ENST00000533946 CHCHD5Q9BSY4 110 aa6.28□□□□□ -1.4
SSBP3-215ENST00000533946 A0A087WX48 190 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 PANO1I0J062 215 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 PDE6DO43924 150 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 IFNA1P01562 189 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 CEBPGP53567 150 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 SRSF3P84103 164 aaKnown RBP6.27□□□□□ -1.41
SSBP3-215ENST00000533946 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 LINC00269Q8N2A0 174 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 LYPD6BQ8NI32 183 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 DAZAP1Q96EP5 407 aaKnown RBP6.27□□□□□ -1.41
SSBP3-215ENST00000533946 AP1S3Q96PC3 154 aa6.27□□□□□ -1.41
SSBP3-215ENST00000533946 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
SSBP3-215ENST00000533946 IGLV10-54A0A075B6I4 117 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
SSBP3-215ENST00000533946 PRSS1P07477 247 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 INAFM2P0DMQ5 153 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 CTRLP40313 264 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 EIF5AL1Q6IS14 154 aaKnown RBP6.26□□□□□ -1.41
SSBP3-215ENST00000533946 Q6ZSA8 131 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 C20orf203Q8NBC4 194 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 TM2D2Q9BX73 214 aa6.26□□□□□ -1.41
SSBP3-215ENST00000533946 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
SSBP3-215ENST00000533946 SLPIP03973 132 aa6.25□□□□□ -1.41
SSBP3-215ENST00000533946 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
SSBP3-215ENST00000533946 TWIST1Q15672 202 aa6.25□□□□□ -1.41
SSBP3-215ENST00000533946 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
SSBP3-215ENST00000533946 PGLYRP4Q96LB8 373 aa6.25□□□□□ -1.41
SSBP3-215ENST00000533946 URGCP-MRPS24S4R325 110 aa6.25□□□□□ -1.41
SSBP3-215ENST00000533946 USP17L23D6RBM5 183 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 HLA-DQA1P01909 254 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 SRP19P09132 144 aaKnown RBP6.24□□□□□ -1.41
SSBP3-215ENST00000533946 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
SSBP3-215ENST00000533946 CACNG7P62955 275 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 PRR34Q9NV39 138 aa6.24□□□□□ -1.41
SSBP3-215ENST00000533946 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
SSBP3-215ENST00000533946 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
SSBP3-215ENST00000533946 DPH3P1Q9H4G8 78 aa6.23□□□□□ -1.41
SSBP3-215ENST00000533946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-215ENST00000533946 IGKV2-29A2NJV5 120 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-215ENST00000533946 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 F2Z2F3 143 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 SMKR1H3BMG3 65 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 GATCO43716 136 aaKnown RBP6.22□□□□□ -1.41
SSBP3-215ENST00000533946 LINC01551Q86U37 167 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 LINC00528Q8N1L1 170 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 FRZBQ92765 325 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 SMIM12Q96EX1 92 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 RNF185Q96GF1 192 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms