RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 NDUFS6O75380 124 aaKnown RBP5.93□□□□□ -1.46
COPB1-210ENST00000533533 TWIST1Q15672 202 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 FAM74A3Q4VXF1 159 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 OR10J3Q5JRS4 329 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 UFSP1Q6NVU6 142 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 C15orf54Q8N8G6 183 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 BORCS7Q96B45 105 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 PGLYRP4Q96LB8 373 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 MSRB1Q9NZV6 116 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 NAT8Q9UHE5 227 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 LY96Q9Y6Y9 160 aa5.93□□□□□ -1.46
COPB1-210ENST00000533533 TRAV8-6A0A0B4J262 113 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 TRGC1P0CF51 173 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 NTF3P20783 257 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 XGP55808 180 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 RAB4BP61018 213 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 RPL36AP83881 106 aaKnown RBP5.92□□□□□ -1.46
COPB1-210ENST00000533533 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 WFDC10BQ8IUB3 73 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 RPL36ALQ969Q0 106 aaKnown RBP5.92□□□□□ -1.46
COPB1-210ENST00000533533 SMDT1Q9H4I9 107 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 Q9UF83 564 aa5.92□□□□□ -1.46
COPB1-210ENST00000533533 EREGO14944 169 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 EVI2AP22794 236 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 FUSP35637 526 aaKnown RBP eCLIP5.91□□□□□ -1.461e-5■■■□□ 16.6
COPB1-210ENST00000533533 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
COPB1-210ENST00000533533 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 GTSF1LQ9H1H1 148 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 OSTCQ9NRP0 149 aa5.91□□□□□ -1.46
COPB1-210ENST00000533533 TRAV9-2A0A087WT02 112 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 TRBV10-1A0A0K0K1A3 114 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 CTRLP40313 264 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 IFITM2Q01629 132 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 CLLU1Q5K131 121 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 Q5VSD8 79 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.9□□□□□ -1.46
COPB1-210ENST00000533533 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 FRZBQ92765 325 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 ISOC2Q96AB3 205 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 DPH3P1Q9H4G8 78 aa5.9□□□□□ -1.46
COPB1-210ENST00000533533 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.47
COPB1-210ENST00000533533 TRBV7-3A0A075B6L6 115 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 IGHV3-38A0A0C4DH36 116 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 HIGD1CA8MV81 97 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 H7C1H1 209 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 IGHV3-30P01768 117 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 IGHV3-30-3P0DP02 117 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 IGHV3-30-5P0DP03 117 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 TIRAPP58753 221 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 CT83Q5H943 113 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 LELP1Q5T871 98 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 WDR73Q6P4I2 378 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 TNFRSF18Q9Y5U5 241 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
COPB1-210ENST00000533533 A0A087WWC5 75 aa5.88□□□□□ -1.47
COPB1-210ENST00000533533 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
COPB1-210ENST00000533533 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
COPB1-210ENST00000533533 V9GYV3 84 aa5.88□□□□□ -1.47
COPB1-210ENST00000533533 A0A087WTM6 91 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 A0A1B0GUT8 65 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
COPB1-210ENST00000533533 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 LINC00694P0DN24 101 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 FOXA3P55318 350 aaPredicted RBP5.87□□□□□ -1.47
COPB1-210ENST00000533533 UBE2D3P61077 147 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 UBE2D2P62837 147 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 RIGQ13278 110 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 KCNIP4Q6PIL6 250 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 RASL11AQ6T310 242 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 CNFNQ9BYD5 112 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 URGCP-MRPS24S4R325 110 aa5.87□□□□□ -1.47
COPB1-210ENST00000533533 TRAV26-2A0A0B4J265 109 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 FAM231BA6NCW3 169 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 TMEM262E9PQX1 116 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 M0QY20 66 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
COPB1-210ENST00000533533 COMMD7Q86VX2 200 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 C10orf126Q8N4M7 172 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 NUP35Q8NFH5 326 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 DNAJC30Q96LL9 226 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 Q9HAA7 133 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
COPB1-210ENST00000533533 A0A087WX48 190 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 F8W036 122 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 GCSHP23434 173 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 CAMPP49913 170 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 DAZ4Q86SG3 579 aaKnown RBP5.85□□□□□ -1.47
COPB1-210ENST00000533533 CHCHD5Q9BSY4 110 aa5.85□□□□□ -1.47
COPB1-210ENST00000533533 NIT2Q9NQR4 276 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms