RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 OR10J3Q5JRS4 329 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 LELP1Q5T871 98 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-210ENST00000532935 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-210ENST00000532935 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
CPSF1-210ENST00000532935 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
CPSF1-210ENST00000532935 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
CPSF1-210ENST00000532935 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
CPSF1-210ENST00000532935 TNFRSF18Q9Y5U5 241 aa10.42□□□□□ -0.74
CPSF1-210ENST00000532935 LRP1BQ9NZR2 4599 aa10.41□□□□□ -0.74
CPSF1-210ENST00000532935 P01737 135 aa10.41□□□□□ -0.74
CPSF1-210ENST00000532935 GZMBP10144 247 aa10.41□□□□□ -0.74
CPSF1-210ENST00000532935 LINC01556Q5JQF7 62 aa10.41□□□□□ -0.74
CPSF1-210ENST00000532935 IGLC6P0CF74 106 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 RAB5AP20339 215 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 SSTP61278 116 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 CT83Q5H943 113 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 NFE4Q86UQ8 179 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 V9GYV3 84 aa10.4□□□□□ -0.74
CPSF1-210ENST00000532935 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
CPSF1-210ENST00000532935 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
CPSF1-210ENST00000532935 RAB4BP61018 213 aa10.39□□□□□ -0.75
CPSF1-210ENST00000532935 ZNF56Q15929 161 aa10.39□□□□□ -0.75
CPSF1-210ENST00000532935 TPPP3Q9BW30 176 aa10.39□□□□□ -0.75
CPSF1-210ENST00000532935 FAM231BA6NCW3 169 aa10.38□□□□□ -0.75
CPSF1-210ENST00000532935 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
CPSF1-210ENST00000532935 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
CPSF1-210ENST00000532935 RYR1P21817 5038 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 RPL36AP83881 106 aaKnown RBP10.37□□□□□ -0.75
CPSF1-210ENST00000532935 COX19Q49B96 90 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 SPATA12Q7Z6I5 190 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 RPL36ALQ969Q0 106 aaKnown RBP10.37□□□□□ -0.75
CPSF1-210ENST00000532935 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
CPSF1-210ENST00000532935 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 SMIM27A0A1W2PRY6 76 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 A8MWL6 223 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 F2Z2F3 143 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 IGHV3-30P01768 117 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 SMIM17P0DL12 118 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 IGHV3-30-5P0DP03 117 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 CACNG7P62955 275 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 GFRA4Q9GZZ7 299 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
CPSF1-210ENST00000532935 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
CPSF1-210ENST00000532935 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 C1orf196B1AJZ1 125 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 IBA57-AS1B1ANH7 110 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 F5H697 171 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 UBE2D3P61077 147 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 UBE2D2P62837 147 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
CPSF1-210ENST00000532935 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
CPSF1-210ENST00000532935 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
CPSF1-210ENST00000532935 RAB5BP61020 215 aa10.34□□□□□ -0.75
CPSF1-210ENST00000532935 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
CPSF1-210ENST00000532935 Q8N3U1 123 aa10.34□□□□□ -0.75
CPSF1-210ENST00000532935 APOBP04114 4563 aaKnown RBP10.33□□□□□ -0.76
CPSF1-210ENST00000532935 CTRLP40313 264 aa10.33□□□□□ -0.76
CPSF1-210ENST00000532935 RPS10P46783 165 aaKnown RBP10.33□□□□□ -0.76
CPSF1-210ENST00000532935 FOXA3P55318 350 aaPredicted RBP10.33□□□□□ -0.76
CPSF1-210ENST00000532935 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
CPSF1-210ENST00000532935 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
CPSF1-210ENST00000532935 EREGO14944 169 aa10.32□□□□□ -0.76
CPSF1-210ENST00000532935 MGPP08493 103 aa10.32□□□□□ -0.76
CPSF1-210ENST00000532935 WDR73Q6P4I2 378 aa10.32□□□□□ -0.76
CPSF1-210ENST00000532935 Q9HAA7 133 aa10.32□□□□□ -0.76
CPSF1-210ENST00000532935 HSPG2P98160 4391 aa10.32□□□□□ -0.76
CPSF1-210ENST00000532935 A0A087WTM6 91 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 NTF3P20783 257 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 LAGE3Q14657 143 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
CPSF1-210ENST00000532935 DAZ4Q86SG3 579 aaKnown RBP10.3□□□□□ -0.76
CPSF1-210ENST00000532935 NIT1Q86X76 327 aa10.3□□□□□ -0.76
CPSF1-210ENST00000532935 DAZ3Q9NR90 486 aaKnown RBP10.3□□□□□ -0.76
CPSF1-210ENST00000532935 M0QY20 66 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 PSCAO43653 123 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 MT-ND6P03923 174 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 TWIST1Q15672 202 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 GNB1LQ9BYB4 327 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 DPH3P1Q9H4G8 78 aa10.29□□□□□ -0.76
CPSF1-210ENST00000532935 TRBV6-8A0A0A6YYG3 113 aa10.28□□□□□ -0.76
CPSF1-210ENST00000532935 H7C1H1 209 aa10.28□□□□□ -0.76
CPSF1-210ENST00000532935 NUP35Q8NFH5 326 aa10.28□□□□□ -0.76
CPSF1-210ENST00000532935 A0A1B0GW15 77 aa10.27□□□□□ -0.77
CPSF1-210ENST00000532935 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
CPSF1-210ENST00000532935 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms