RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 TWIST1Q15672 202 aa10.87□□□□□ -0.67
TSPAN4-218ENST00000529566 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
TSPAN4-218ENST00000529566 Q8N3U1 123 aa10.87□□□□□ -0.67
TSPAN4-218ENST00000529566 IFITM2Q01629 132 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 C10orf126Q8N4M7 172 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 PGLYRP4Q96LB8 373 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 GFRA4Q9GZZ7 299 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 V9GYV3 84 aa10.86□□□□□ -0.67
TSPAN4-218ENST00000529566 IBA57-AS1B1ANH7 110 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 IGHV3-30P01768 117 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 MGPP08493 103 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 IGHV3-30-5P0DP03 117 aa10.85□□□□□ -0.67
TSPAN4-218ENST00000529566 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
TSPAN4-218ENST00000529566 NFE4Q86UQ8 179 aa10.84□□□□□ -0.67
TSPAN4-218ENST00000529566 TRBV6-8A0A0A6YYG3 113 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 HIGD1CA8MV81 97 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 RAB14P61106 215 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 ADIRFQ15847 76 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 NIT1Q86X76 327 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 C15orf54Q8N8G6 183 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 DNAJC30Q96LL9 226 aa10.83□□□□□ -0.68
TSPAN4-218ENST00000529566 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 H7C1H1 209 aa10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 RASL11AQ6T310 242 aa10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 NTM-AS1Q6ZSK4 140 aa10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-218ENST00000529566 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
TSPAN4-218ENST00000529566 DNAH5Q8TE73 4624 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 LAGE3Q14657 143 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 NUP35Q8NFH5 326 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 NIT2Q9NQR4 276 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 LRP1BQ9NZR2 4599 aa10.8□□□□□ -0.68
TSPAN4-218ENST00000529566 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
TSPAN4-218ENST00000529566 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
TSPAN4-218ENST00000529566 KRTAP10-2P60368 255 aa10.78□□□□□ -0.68
TSPAN4-218ENST00000529566 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
TSPAN4-218ENST00000529566 FRZBQ92765 325 aa10.78□□□□□ -0.68
TSPAN4-218ENST00000529566 CHCHD7Q9BUK0 85 aa10.78□□□□□ -0.68
TSPAN4-218ENST00000529566 HERC2O95714 4834 aa10.77□□□□□ -0.68
TSPAN4-218ENST00000529566 TMEM97Q5BJF2 176 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 Q9HAA7 133 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
TSPAN4-218ENST00000529566 A0A087WTM6 91 aa10.76□□□□□ -0.69
TSPAN4-218ENST00000529566 IQCJQ1A5X6 159 aa10.76□□□□□ -0.69
TSPAN4-218ENST00000529566 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-218ENST00000529566 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
TSPAN4-218ENST00000529566 A0A087WX48 190 aa10.75□□□□□ -0.69
TSPAN4-218ENST00000529566 LRCOL1A6NCL2 159 aa10.75□□□□□ -0.69
TSPAN4-218ENST00000529566 GAS8-AS1O95177 125 aa10.75□□□□□ -0.69
TSPAN4-218ENST00000529566 URGCP-MRPS24S4R325 110 aa10.75□□□□□ -0.69
TSPAN4-218ENST00000529566 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 RAB4AP20338 218 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 RIGQ13278 110 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 MPV17L2Q567V2 206 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 KLK12Q9UKR0 248 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 RYR1P21817 5038 aa10.74□□□□□ -0.69
TSPAN4-218ENST00000529566 IGHV1-24A0A0C4DH33 117 aa10.73□□□□□ -0.69
TSPAN4-218ENST00000529566 C16orf90A8MZG2 172 aa10.73□□□□□ -0.69
TSPAN4-218ENST00000529566 ATRAIDQ6UW56 229 aa10.73□□□□□ -0.69
TSPAN4-218ENST00000529566 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
TSPAN4-218ENST00000529566 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
TSPAN4-218ENST00000529566 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
TSPAN4-218ENST00000529566 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
TSPAN4-218ENST00000529566 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
TSPAN4-218ENST00000529566 FUSP35637 526 aaKnown RBP eCLIP10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 PKIAP61925 76 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 RBX1P62877 108 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 PNRC1Q12796 327 aaPredicted RBP10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 GAGE6Q13070 117 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 ELOBQ15370 118 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 KCNIP4Q6PIL6 250 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 UQCC3Q6UW78 93 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 Q8N976 141 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
TSPAN4-218ENST00000529566 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 EREGO14944 169 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 PSCAO43653 123 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 RPS10P46783 165 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 UBE2WQ96B02 151 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 PGPEP1Q9NXJ5 209 aa10.7□□□□□ -0.7
TSPAN4-218ENST00000529566 HSPG2P98160 4391 aa10.69□□□□□ -0.7
TSPAN4-218ENST00000529566 A0A1B0GW15 77 aa10.69□□□□□ -0.7
TSPAN4-218ENST00000529566 A0A1B0GXF2 115 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms