RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 UBE2D3P61077 147 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 UBE2D2P62837 147 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 PEA15Q15121 130 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
PKP3-204ENST00000526971 C10orf126Q8N4M7 172 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 GTSF1Q8WW33 167 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 CNFNQ9BYD5 112 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 TRGC1P0CF51 173 aa12.87□□□□□ -0.35
PKP3-204ENST00000526971 FUSP35637 526 aaKnown RBP eCLIP12.87□□□□□ -0.35
PKP3-204ENST00000526971 SRSF3P84103 164 aaKnown RBP12.87□□□□□ -0.35
PKP3-204ENST00000526971 FAM74A3Q4VXF1 159 aa12.87□□□□□ -0.35
PKP3-204ENST00000526971 SMDT1Q9H4I9 107 aa12.87□□□□□ -0.35
PKP3-204ENST00000526971 VPS13BQ7Z7G8 4022 aa12.86□□□□□ -0.35
PKP3-204ENST00000526971 A8MWL6 223 aa12.86□□□□□ -0.35
PKP3-204ENST00000526971 CT83Q5H943 113 aa12.86□□□□□ -0.35
PKP3-204ENST00000526971 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
PKP3-204ENST00000526971 MGPP08493 103 aa12.85□□□□□ -0.35
PKP3-204ENST00000526971 TWIST1Q15672 202 aa12.85□□□□□ -0.35
PKP3-204ENST00000526971 TMEM241Q24JQ0 296 aa12.85□□□□□ -0.35
PKP3-204ENST00000526971 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 IGHV3-33P01772 117 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
PKP3-204ENST00000526971 IBA57-AS1B1ANH7 110 aa12.83□□□□□ -0.36
PKP3-204ENST00000526971 M0QY20 66 aa12.83□□□□□ -0.36
PKP3-204ENST00000526971 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
PKP3-204ENST00000526971 SUMO4Q6EEV6 95 aa12.83□□□□□ -0.36
PKP3-204ENST00000526971 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
PKP3-204ENST00000526971 H7C1H1 209 aa12.82□□□□□ -0.36
PKP3-204ENST00000526971 PGLYRP4Q96LB8 373 aa12.82□□□□□ -0.36
PKP3-204ENST00000526971 EPM2AB3EWF7 344 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 RAB14P61106 215 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 RPL23P62829 140 aaKnown RBP12.81□□□□□ -0.36
PKP3-204ENST00000526971 Q8N3U1 123 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 C15orf54Q8N8G6 183 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
PKP3-204ENST00000526971 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 ISOC2Q96AB3 205 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 DNAJC30Q96LL9 226 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 NAT8Q9UHE5 227 aa12.81□□□□□ -0.36
PKP3-204ENST00000526971 FLG2Q5D862 2391 aaPredicted RBP12.8□□□□□ -0.36
PKP3-204ENST00000526971 XGP55808 180 aa12.8□□□□□ -0.36
PKP3-204ENST00000526971 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
PKP3-204ENST00000526971 NIT1Q86X76 327 aa12.8□□□□□ -0.36
PKP3-204ENST00000526971 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
PKP3-204ENST00000526971 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
PKP3-204ENST00000526971 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
PKP3-204ENST00000526971 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
PKP3-204ENST00000526971 RASL11AQ6T310 242 aa12.79□□□□□ -0.36
PKP3-204ENST00000526971 V9GYV3 84 aa12.79□□□□□ -0.36
PKP3-204ENST00000526971 HIGD1CA8MV81 97 aa12.78□□□□□ -0.36
PKP3-204ENST00000526971 ADIRFQ15847 76 aa12.78□□□□□ -0.36
PKP3-204ENST00000526971 SMIM15Q7Z3B0 74 aa12.78□□□□□ -0.36
PKP3-204ENST00000526971 LAGE3Q14657 143 aa12.77□□□□□ -0.37
PKP3-204ENST00000526971 TMEM97Q5BJF2 176 aa12.77□□□□□ -0.37
PKP3-204ENST00000526971 BORCS7Q96B45 105 aa12.77□□□□□ -0.37
PKP3-204ENST00000526971 URGCP-MRPS24S4R325 110 aa12.77□□□□□ -0.37
PKP3-204ENST00000526971 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
PKP3-204ENST00000526971 CHCHD7Q9BUK0 85 aa12.76□□□□□ -0.37
PKP3-204ENST00000526971 Q9HAA7 133 aa12.76□□□□□ -0.37
PKP3-204ENST00000526971 NIT2Q9NQR4 276 aa12.76□□□□□ -0.37
PKP3-204ENST00000526971 A0A1B0GUT8 65 aa12.75□□□□□ -0.37
PKP3-204ENST00000526971 NTM-AS1Q6ZSK4 140 aa12.75□□□□□ -0.37
PKP3-204ENST00000526971 A0A087WTM6 91 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 A0A087WX48 190 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 EREGO14944 169 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 KRTAP10-1P60331 282 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 CLLU1Q5K131 121 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 Q5VSD8 79 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 KCNIP4Q6PIL6 250 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 FRZBQ92765 325 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
PKP3-204ENST00000526971 TRAV8-3A0A0A6YYJ7 113 aa12.73□□□□□ -0.37
PKP3-204ENST00000526971 TRAV26-2A0A0B4J265 109 aa12.73□□□□□ -0.37
PKP3-204ENST00000526971 TMEM262E9PQX1 116 aa12.73□□□□□ -0.37
PKP3-204ENST00000526971 NUP35Q8NFH5 326 aa12.73□□□□□ -0.37
PKP3-204ENST00000526971 CHCHD5Q9BSY4 110 aa12.73□□□□□ -0.37
PKP3-204ENST00000526971 PSCAO43653 123 aa12.72□□□□□ -0.37
PKP3-204ENST00000526971 IFITM2Q01629 132 aa12.72□□□□□ -0.37
PKP3-204ENST00000526971 ELOBQ15370 118 aa12.72□□□□□ -0.37
PKP3-204ENST00000526971 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
PKP3-204ENST00000526971 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
PKP3-204ENST00000526971 PKIAP61925 76 aa12.71□□□□□ -0.37
PKP3-204ENST00000526971 IQCJQ1A5X6 159 aa12.71□□□□□ -0.37
PKP3-204ENST00000526971 TM2D2Q9BX73 214 aa12.71□□□□□ -0.37
PKP3-204ENST00000526971 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.37
PKP3-204ENST00000526971 KLK12Q9UKR0 248 aa12.71□□□□□ -0.37
PKP3-204ENST00000526971 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.38
PKP3-204ENST00000526971 TRBV25-1A0A075B6N4 114 aa12.7□□□□□ -0.38
PKP3-204ENST00000526971 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
PKP3-204ENST00000526971 SMIM27A0A1W2PRY6 76 aa12.7□□□□□ -0.38
PKP3-204ENST00000526971 RIGQ13278 110 aa12.7□□□□□ -0.38
PKP3-204ENST00000526971 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
PKP3-204ENST00000526971 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
PKP3-204ENST00000526971 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms