RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 MED12Q93074 2177 aa1.75□□□□□ -2.13
ATXN3-213ENST00000526245 SPTBP11277 2137 aa1.75□□□□□ -2.13
ATXN3-213ENST00000526245 CHD1O14646 1710 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 TTC37Q6PGP7 1564 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 UBE2L5PA0A1B0GUS4 154 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 M0R143 59 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 UBE2L3P68036 154 aaKnown RBP1.74□□□□□ -2.13
ATXN3-213ENST00000526245 FXYD3Q14802 87 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 ZNF818PQ6ZRF7 136 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 TTC9CQ8N5M4 171 aa1.74□□□□□ -2.13
ATXN3-213ENST00000526245 MAP2P11137 1827 aaKnown RBP1.74□□□□□ -2.13
ATXN3-213ENST00000526245 LRRC37A3O60309 1634 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 SIPA1L3O60292 1781 aaPredicted RBP1.73□□□□□ -2.13
ATXN3-213ENST00000526245 ARHGAP5Q13017 1502 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 TRAV13-2A0A0B4J235 113 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 SSSCA1O60232 199 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 UBE2D1P51668 147 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 Q6ZQY7 126 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 COMMD6Q7Z4G1 85 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 ZNF609O15014 1411 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 CASKIN1Q8WXD9 1431 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 PSME4Q14997 1843 aa1.73□□□□□ -2.13
ATXN3-213ENST00000526245 PRDM2Q13029 1718 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 ABCC10Q5T3U5 1492 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 HCG22E2RYF7 251 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 TMEM262E9PQX1 116 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 PPP1R1CQ8WVI7 109 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 C10orf71Q711Q0 1435 aa1.72□□□□□ -2.13
ATXN3-213ENST00000526245 MED13Q9UHV7 2174 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 NCR3O14931 201 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 SIX6O95475 246 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 S100A10P60903 97 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 PKIAP61925 76 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 DCDP81605 110 aaKnown RBP1.71□□□□□ -2.14
ATXN3-213ENST00000526245 DPH3P1Q9H4G8 78 aa1.71□□□□□ -2.14
ATXN3-213ENST00000526245 ABCA4P78363 2273 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 PXDNQ92626 1479 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 CCL3L1P16619 93 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 CAV3P56539 151 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 NCMAPQ5T1S8 102 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 LINC00575Q6W349 94 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 CYP4F30PQ9H0H9 118 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 FBN1P35555 2871 aaKnown RBP1.7□□□□□ -2.14
ATXN3-213ENST00000526245 SORL1Q92673 2214 aa1.7□□□□□ -2.14
ATXN3-213ENST00000526245 H3BQ15 152 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 FXYD1O00168 92 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 SSBP1Q04837 148 aaKnown RBP1.69□□□□□ -2.14
ATXN3-213ENST00000526245 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 ZNF56Q15929 161 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 C20orf197Q8N268 126 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 LINC00208Q96KT6 92 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 CCL19Q99731 98 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 BET1LQ9NYM9 111 aa1.69□□□□□ -2.14
ATXN3-213ENST00000526245 NCOA6Q14686 2063 aaPredicted RBP1.69□□□□□ -2.14
ATXN3-213ENST00000526245 ASCC3Q8N3C0 2202 aaKnown RBP1.68□□□□□ -2.14
ATXN3-213ENST00000526245 PPIP5K1Q6PFW1 1433 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 TRBV7-1A0A0A6YYK4 115 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 FAM74A4Q5TZK3 123 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 Q86TA4 180 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 LINC00312Q9Y6C7 94 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 FYCO1Q9BQS8 1478 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 TECTAO75443 2155 aa1.68□□□□□ -2.14
ATXN3-213ENST00000526245 SCAPERQ9BY12 1400 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 RBAKDNA6NC62 111 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 EFNA4P52798 201 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 MYOZ3Q8TDC0 251 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 COX7B2Q8TF08 81 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 RB1CC1Q8TDY2 1594 aa1.67□□□□□ -2.14
ATXN3-213ENST00000526245 TROQ12816 1431 aaPredicted RBP1.66□□□□□ -2.14
ATXN3-213ENST00000526245 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
ATXN3-213ENST00000526245 TRBV30A0A0K0K1B3 111 aa1.66□□□□□ -2.14
ATXN3-213ENST00000526245 LYNX1P0DP58 116 aa1.66□□□□□ -2.14
ATXN3-213ENST00000526245 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
ATXN3-213ENST00000526245 GAPVD1Q14C86 1478 aa1.66□□□□□ -2.14
ATXN3-213ENST00000526245 TEX14Q8IWB6 1497 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 CLPSL1A2RUU4 121 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 MPC2O95563 127 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 ELOF1P60002 83 aaKnown RBP1.65□□□□□ -2.15
ATXN3-213ENST00000526245 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 COL5A1-AS1Q5SY13 56 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 KIAA1551Q9HCM1 1747 aa1.65□□□□□ -2.15
ATXN3-213ENST00000526245 A0A1W2PPM0 123 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 C10orf128Q5T292 105 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 TMEM14BQ9NUH8 114 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 AP4S1Q9Y587 144 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 PI4KAP42356 2102 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 LAMC3Q9Y6N6 1575 aa1.64□□□□□ -2.15
ATXN3-213ENST00000526245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.63□□□□□ -2.15
ATXN3-213ENST00000526245 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
ATXN3-213ENST00000526245 PRB1P04280 392 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 SNCAP37840 140 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 KRTAP21-3Q3LHN1 58 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 SNHG12Q9BXW3 62 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 LINC00474Q9P2X8 69 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 V9GYV3 84 aa1.63□□□□□ -2.15
ATXN3-213ENST00000526245 DOCK11Q5JSL3 2073 aa1.62□□□□□ -2.15
ATXN3-213ENST00000526245 A0A087WTM6 91 aa1.62□□□□□ -2.15
ATXN3-213ENST00000526245 EDDM3BP56851 147 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms