RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
ATXN3-213ENST00000526245 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
ATXN3-213ENST00000526245 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
ATXN3-213ENST00000526245 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
ATXN3-213ENST00000526245 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
ATXN3-213ENST00000526245 FOXD1Q16676 465 aa14.34□□□□□ -0.11
ATXN3-213ENST00000526245 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
ATXN3-213ENST00000526245 ADRA2BP18089 450 aa13.84□□□□□ -0.19
ATXN3-213ENST00000526245 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
ATXN3-213ENST00000526245 MSH5O43196 834 aa13.19□□□□□ -0.3
ATXN3-213ENST00000526245 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
ATXN3-213ENST00000526245 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
ATXN3-213ENST00000526245 KCNA4P22459 653 aa12.56□□□□□ -0.4
ATXN3-213ENST00000526245 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-213ENST00000526245 NCBP3Q53F19 620 aaKnown RBP12.46□□□□□ -0.41
ATXN3-213ENST00000526245 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
ATXN3-213ENST00000526245 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
ATXN3-213ENST00000526245 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
ATXN3-213ENST00000526245 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
ATXN3-213ENST00000526245 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-213ENST00000526245 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
ATXN3-213ENST00000526245 POTEDQ86YR6 584 aa11.95□□□□□ -0.5
ATXN3-213ENST00000526245 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
ATXN3-213ENST00000526245 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
ATXN3-213ENST00000526245 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
ATXN3-213ENST00000526245 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
ATXN3-213ENST00000526245 ZBTB22O15209 634 aa11.57□□□□□ -0.56
ATXN3-213ENST00000526245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
ATXN3-213ENST00000526245 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
ATXN3-213ENST00000526245 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
ATXN3-213ENST00000526245 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-213ENST00000526245 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-213ENST00000526245 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
ATXN3-213ENST00000526245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-213ENST00000526245 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
ATXN3-213ENST00000526245 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-213ENST00000526245 C1QBPQ07021 282 aaKnown RBP11.18□□□□□ -0.62
ATXN3-213ENST00000526245 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
ATXN3-213ENST00000526245 APLP2Q06481 763 aa11.08□□□□□ -0.64
ATXN3-213ENST00000526245 ATF5Q9Y2D1 282 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-213ENST00000526245 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-213ENST00000526245 CAPN15O75808 1086 aa10.99□□□□□ -0.65
ATXN3-213ENST00000526245 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
ATXN3-213ENST00000526245 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-213ENST00000526245 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
ATXN3-213ENST00000526245 ABCB7O75027 752 aa10.79□□□□□ -0.68
ATXN3-213ENST00000526245 DSG3P32926 999 aa10.79□□□□□ -0.68
ATXN3-213ENST00000526245 POLA2Q14181 598 aa10.79□□□□□ -0.68
ATXN3-213ENST00000526245 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
ATXN3-213ENST00000526245 FBLN2P98095 1184 aa10.58□□□□□ -0.72
ATXN3-213ENST00000526245 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-213ENST00000526245 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
ATXN3-213ENST00000526245 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
ATXN3-213ENST00000526245 FKBP8Q14318 412 aa10.42□□□□□ -0.74
ATXN3-213ENST00000526245 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
ATXN3-213ENST00000526245 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
ATXN3-213ENST00000526245 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
ATXN3-213ENST00000526245 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
ATXN3-213ENST00000526245 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-213ENST00000526245 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-213ENST00000526245 RBM42Q9BTD8 480 aaKnown RBP10.27□□□□□ -0.77
ATXN3-213ENST00000526245 RTN4Q9NQC3 1192 aaKnown RBP10.25□□□□□ -0.77
ATXN3-213ENST00000526245 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
ATXN3-213ENST00000526245 PROM2Q8N271 834 aa10.18□□□□□ -0.78
ATXN3-213ENST00000526245 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATXN3-213ENST00000526245 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
ATXN3-213ENST00000526245 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-213ENST00000526245 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
ATXN3-213ENST00000526245 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
ATXN3-213ENST00000526245 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
ATXN3-213ENST00000526245 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
ATXN3-213ENST00000526245 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
ATXN3-213ENST00000526245 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-213ENST00000526245 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
ATXN3-213ENST00000526245 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
ATXN3-213ENST00000526245 MIER1Q8N108 512 aa9.82□□□□□ -0.84
ATXN3-213ENST00000526245 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
ATXN3-213ENST00000526245 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
ATXN3-213ENST00000526245 IFNLR1Q8IU57 520 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-213ENST00000526245 CREBZFQ9NS37 354 aa9.76□□□□□ -0.85
ATXN3-213ENST00000526245 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATXN3-213ENST00000526245 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
ATXN3-213ENST00000526245 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
ATXN3-213ENST00000526245 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
ATXN3-213ENST00000526245 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.86
ATXN3-213ENST00000526245 ZBTB47Q9UFB7 747 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-213ENST00000526245 MNX1P50219 401 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-213ENST00000526245 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
ATXN3-213ENST00000526245 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-213ENST00000526245 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
ATXN3-213ENST00000526245 NUBP1P53384 320 aa9.55□□□□□ -0.88
ATXN3-213ENST00000526245 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
ATXN3-213ENST00000526245 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
ATXN3-213ENST00000526245 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-213ENST00000526245 DCAF8Q5TAQ9 597 aa9.48□□□□□ -0.89
ATXN3-213ENST00000526245 POTEHQ6S545 545 aa9.47□□□□□ -0.89
ATXN3-213ENST00000526245 PKD2Q13563 968 aa9.46□□□□□ -0.9
ATXN3-213ENST00000526245 GSE1Q14687 1217 aa9.46□□□□□ -0.9
ATXN3-213ENST00000526245 TSPYL2Q9H2G4 693 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-213ENST00000526245 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms