RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 C15orf54Q8N8G6 183 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 ATP6V0E2Q8NHE4 81 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 NAT8Q9UHE5 227 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 GAGE12JA6NER3 117 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 F5H697 171 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 SIVA1O15304 175 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 TRGC1P0CF51 173 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 GAGE1Q13065 139 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 GAGE4Q13068 117 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 GAGE5Q13069 117 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 Q6ZR54 194 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 C14orf178Q8N769 122 aaPredicted RBP6.11□□□□□ -1.43
COL8A1-207ENST00000483969 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 KRTAP1-5Q9BYS1 174 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 OSTCQ9NRP0 149 aa6.11□□□□□ -1.43
COL8A1-207ENST00000483969 TRAV8-6A0A0B4J262 113 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 C9JQL5 133 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 BTF3P20290 206 aaKnown RBP6.1□□□□□ -1.43
COL8A1-207ENST00000483969 NTF3P20783 257 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 FOXA3P55318 350 aaPredicted RBP6.1□□□□□ -1.43
COL8A1-207ENST00000483969 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
COL8A1-207ENST00000483969 TWIST1Q15672 202 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 ZNF56Q15929 161 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 C1orf134Q5TEV5 83 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
COL8A1-207ENST00000483969 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
COL8A1-207ENST00000483969 BORCS7Q96B45 105 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
COL8A1-207ENST00000483969 A0A087WWC5 75 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 H7C1H1 209 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 K7EP13 123 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 EVI2AP22794 236 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 CTRLP40313 264 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 RPL23P62829 140 aaKnown RBP6.09□□□□□ -1.43
COL8A1-207ENST00000483969 ADIRFQ15847 76 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 OR10G8Q8NGN5 311 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 TSKUQ8WUA8 353 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 GFRA4Q9GZZ7 299 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
COL8A1-207ENST00000483969 TRBV7-3A0A075B6L6 115 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 LELP1Q5T871 98 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 C6orf223Q8N319 242 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 ISOC2Q96AB3 205 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 DNAJC30Q96LL9 226 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 CNFNQ9BYD5 112 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 DPH3P1Q9H4G8 78 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
COL8A1-207ENST00000483969 VPS13DQ5THJ4 4388 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 RYR3Q15413 4870 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 MGPP08493 103 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 LINC00315P59091 139 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 IFITM2Q01629 132 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 Q9UF83 564 aa6.07□□□□□ -1.44
COL8A1-207ENST00000483969 RYR2Q92736 4967 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 DNAH10OSP0CZ25 163 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 UBE2D3P61077 147 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 UBE2D2P62837 147 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 RIGQ13278 110 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 TMEM97Q5BJF2 176 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 WFDC10BQ8IUB3 73 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 C10orf126Q8N4M7 172 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 NEXN-AS1Q8NBZ9 246 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 LYSTQ99698 3801 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 V9GYV3 84 aa6.06□□□□□ -1.44
COL8A1-207ENST00000483969 M0QY20 66 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 PPP1R2P9O14990 202 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 RTL8CO15255 209 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 PNRC1Q12796 327 aaPredicted RBP6.05□□□□□ -1.44
COL8A1-207ENST00000483969 RASL11AQ6T310 242 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 UQCC3Q6UW78 93 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 DAZ4Q86SG3 579 aaKnown RBP6.05□□□□□ -1.44
COL8A1-207ENST00000483969 NFE4Q86UQ8 179 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 FRZBQ92765 325 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 NIT2Q9NQR4 276 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 DAZ3Q9NR90 486 aaKnown RBP6.05□□□□□ -1.44
COL8A1-207ENST00000483969 NAT8BQ9UHF3 227 aa6.05□□□□□ -1.44
COL8A1-207ENST00000483969 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
COL8A1-207ENST00000483969 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
COL8A1-207ENST00000483969 KCNIP4Q6PIL6 250 aa6.04□□□□□ -1.44
COL8A1-207ENST00000483969 NUP35Q8NFH5 326 aa6.04□□□□□ -1.44
COL8A1-207ENST00000483969 URGCP-MRPS24S4R325 110 aa6.04□□□□□ -1.44
COL8A1-207ENST00000483969 TRBV6-8A0A0A6YYG3 113 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms