RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 ERVFC1-1P60608 527 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 SSTP61278 116 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 CACNG7P62955 275 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
SP140-210ENST00000479539 LAGE3Q14657 143 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 ZNF56Q15929 161 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 WDR73Q6P4I2 378 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 NIT1Q86X76 327 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 NEXN-AS1Q8NBZ9 246 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 TPPP3Q9BW30 176 aa7.06□□□□□ -1.28
SP140-210ENST00000479539 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
SP140-210ENST00000479539 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 F5H697 171 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 SMIM17P0DL12 118 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 FAM210AQ96ND0 272 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
SP140-210ENST00000479539 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
SP140-210ENST00000479539 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 NTF3P20783 257 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 CTRLP40313 264 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 TOR2AQ5JU69 321 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
SP140-210ENST00000479539 CHCHD7Q9BUK0 85 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
SP140-210ENST00000479539 RPP21Q9H633 154 aaKnown RBP7.04□□□□□ -1.28
SP140-210ENST00000479539 Q9HAA7 133 aa7.04□□□□□ -1.28
SP140-210ENST00000479539 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
SP140-210ENST00000479539 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 M0QY20 66 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 TRGC1P0CF51 173 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 TM2D2Q9BX73 214 aa7.03□□□□□ -1.28
SP140-210ENST00000479539 PSCAO43653 123 aa7.02□□□□□ -1.29
SP140-210ENST00000479539 SRP19P09132 144 aaKnown RBP7.02□□□□□ -1.29
SP140-210ENST00000479539 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
SP140-210ENST00000479539 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.02□□□□□ -1.29
SP140-210ENST00000479539 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
SP140-210ENST00000479539 URGCP-MRPS24S4R325 110 aa7.02□□□□□ -1.29
SP140-210ENST00000479539 A0A087WX48 190 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 H7C1H1 209 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 GATCO43716 136 aaKnown RBP7.01□□□□□ -1.29
SP140-210ENST00000479539 MGPP08493 103 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
SP140-210ENST00000479539 CEBPGP53567 150 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
SP140-210ENST00000479539 TWIST1Q15672 202 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 TMEM97Q5BJF2 176 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 CT83Q5H943 113 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 TEX261Q6UWH6 196 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 LINC01551Q86U37 167 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 SMIM7Q9BQ49 75 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
SP140-210ENST00000479539 ZNF727A8MUV8 499 aa7□□□□□ -1.29
SP140-210ENST00000479539 A8MWL6 223 aa7□□□□□ -1.29
SP140-210ENST00000479539 TMEM262E9PQX1 116 aa7□□□□□ -1.29
SP140-210ENST00000479539 ELOBQ15370 118 aa7□□□□□ -1.29
SP140-210ENST00000479539 LCE3BQ5TA77 95 aa7□□□□□ -1.29
SP140-210ENST00000479539 RASL11AQ6T310 242 aa7□□□□□ -1.29
SP140-210ENST00000479539 KLK12Q9UKR0 248 aa7□□□□□ -1.29
SP140-210ENST00000479539 COX11Q9Y6N1 276 aa7□□□□□ -1.29
SP140-210ENST00000479539 IQCJQ1A5X6 159 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 FAM74A3Q4VXF1 159 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 KCNIP4Q6PIL6 250 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 Q8N814 137 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 MAPKAPK5-AS1Q8N8E1 139 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
SP140-210ENST00000479539 FRZBQ92765 325 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 NIT2Q9NQR4 276 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 OSTCQ9NRP0 149 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
SP140-210ENST00000479539 C9JQL5 133 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 PKIAP61925 76 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 WFDC2Q14508 124 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 ATRAIDQ6UW56 229 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 UBE2WQ96B02 151 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 RMI2Q96E14 147 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 PGLYRP4Q96LB8 373 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 CHCHD5Q9BSY4 110 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 SMDT1Q9H4I9 107 aa6.98□□□□□ -1.29
SP140-210ENST00000479539 TRBV25-1A0A075B6N4 114 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 GCSHP23434 173 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 KRTAP10-1P60331 282 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 Q0VG73 95 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 TMEM241Q24JQ0 296 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 ENHOQ6UWT2 76 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 SMIM15Q7Z3B0 74 aa6.97□□□□□ -1.29
SP140-210ENST00000479539 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms