RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TRAV8-6A0A0B4J262 113 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 EVI2AP22794 236 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 RIGQ13278 110 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 Q6ZSN1 163 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 JPT2Q9H910 190 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
CLCNKA-205ENST00000477360 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 IGHV3-38A0A0C4DH36 116 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 MUC21A0A0G2JKD1 596 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 MUC21A0A140T8X8 626 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 SMIM17P0DL12 118 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 LINC00315P59091 139 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 GATD1Q8NB37 220 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 FRZBQ92765 325 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 RPS10P5Q9NQ39 176 aa8.43□□□□□ -1.06
CLCNKA-205ENST00000477360 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 A0A087WWL8 130 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 RPL36AP83881 106 aaKnown RBP8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 TWIST1Q15672 202 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 KCNIP4Q6PIL6 250 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 RPL36ALQ969Q0 106 aaKnown RBP8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 TMEM191AQ9H0A3 160 aa8.42□□□□□ -1.06
CLCNKA-205ENST00000477360 H7C1H1 209 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 S100A8P05109 93 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 HBBP68871 147 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 LAGE3Q14657 143 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 SMIM15Q7Z3B0 74 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
CLCNKA-205ENST00000477360 GAGE12JA6NER3 117 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 S100PP25815 95 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 UBE2D3P61077 147 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 UBE2D2P62837 147 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 GAGE1Q13065 139 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 GAGE4Q13068 117 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 GAGE5Q13069 117 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 GAGE13Q4V321 117 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 DNAJC30Q96LL9 226 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 CHCHD7Q9BUK0 85 aa8.4□□□□□ -1.06
CLCNKA-205ENST00000477360 ZNF56Q15929 161 aa8.39□□□□□ -1.07
CLCNKA-205ENST00000477360 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
CLCNKA-205ENST00000477360 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
CLCNKA-205ENST00000477360 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 S100A1P23297 94 aa8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 SSTP61278 116 aa8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 PKIAP61925 76 aa8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 COX19Q49B96 90 aa8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 MRPL54Q6P161 138 aaKnown RBP8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
CLCNKA-205ENST00000477360 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
CLCNKA-205ENST00000477360 M0QY20 66 aa8.37□□□□□ -1.07
CLCNKA-205ENST00000477360 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
CLCNKA-205ENST00000477360 F5H697 171 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 RAB4AP20338 218 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 CAMPP49913 170 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 TNP2Q05952 138 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 ELOBQ15370 118 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 FAM104BQ5XKR9 115 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 NEXN-AS1Q8NBZ9 246 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 SMCO4Q9NRQ5 59 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 Q9UF83 564 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 URGCP-MRPS24S4R325 110 aa8.36□□□□□ -1.07
CLCNKA-205ENST00000477360 MGPP08493 103 aa8.35□□□□□ -1.07
CLCNKA-205ENST00000477360 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
CLCNKA-205ENST00000477360 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
CLCNKA-205ENST00000477360 MRAP2Q96G30 205 aa8.35□□□□□ -1.07
CLCNKA-205ENST00000477360 TRBV6-8A0A0A6YYG3 113 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 NIT1Q86X76 327 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 PKD1P98161 4303 aa8.34□□□□□ -1.07
CLCNKA-205ENST00000477360 TRBV6-5A0A0K0K1A5 114 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 EREGO14944 169 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 PPP1R17O96001 155 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 HLA-DQA1P01909 254 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 PPBPP02775 128 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 MT-ND6P03923 174 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
CLCNKA-205ENST00000477360 COX11Q9Y6N1 276 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms