RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 UBE2D3P61077 147 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 UBE2D2P62837 147 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 CACNG7P62955 275 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 SPATA12Q7Z6I5 190 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 KRTAP4-6Q9BYQ5 205 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
CALD1-215ENST00000472096 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
CALD1-215ENST00000472096 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
CALD1-215ENST00000472096 KIF25-AS1Q9Y6Z4 181 aa10.15□□□□□ -0.78
CALD1-215ENST00000472096 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 CTRLP40313 264 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 CEBPGP53567 150 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 LRP1BQ9NZR2 4599 aa10.14□□□□□ -0.79
CALD1-215ENST00000472096 DNAH5Q8TE73 4624 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 IBA57-AS1B1ANH7 110 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 F2Z2F3 143 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 F5H697 171 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 ERVFC1-1P60608 527 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 LYZL1Q6UWQ5 148 aa10.13□□□□□ -0.79
CALD1-215ENST00000472096 MGPP08493 103 aa10.12□□□□□ -0.79
CALD1-215ENST00000472096 KRTAP10-2P60368 255 aa10.12□□□□□ -0.79
CALD1-215ENST00000472096 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
CALD1-215ENST00000472096 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
CALD1-215ENST00000472096 TRGC1P0CF51 173 aa10.11□□□□□ -0.79
CALD1-215ENST00000472096 LAGE3Q14657 143 aa10.11□□□□□ -0.79
CALD1-215ENST00000472096 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
CALD1-215ENST00000472096 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
CALD1-215ENST00000472096 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
CALD1-215ENST00000472096 A0A087WTM6 91 aa10.1□□□□□ -0.79
CALD1-215ENST00000472096 Q9HAA7 133 aa10.1□□□□□ -0.79
CALD1-215ENST00000472096 RYR1P21817 5038 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 ZNF727A8MUV8 499 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 GATCO43716 136 aaKnown RBP10.09□□□□□ -0.79
CALD1-215ENST00000472096 NTF3P20783 257 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 SUMO4Q6EEV6 95 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 WDR73Q6P4I2 378 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 LINC01551Q86U37 167 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 NIT1Q86X76 327 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
CALD1-215ENST00000472096 H7C1H1 209 aa10.08□□□□□ -0.8
CALD1-215ENST00000472096 M0QY20 66 aa10.08□□□□□ -0.8
CALD1-215ENST00000472096 CT83Q5H943 113 aa10.08□□□□□ -0.8
CALD1-215ENST00000472096 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
CALD1-215ENST00000472096 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
CALD1-215ENST00000472096 URGCP-MRPS24S4R325 110 aa10.08□□□□□ -0.8
CALD1-215ENST00000472096 HSPG2P98160 4391 aa10.07□□□□□ -0.8
CALD1-215ENST00000472096 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
CALD1-215ENST00000472096 PSCAO43653 123 aa10.07□□□□□ -0.8
CALD1-215ENST00000472096 TWIST1Q15672 202 aa10.07□□□□□ -0.8
CALD1-215ENST00000472096 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
CALD1-215ENST00000472096 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
CALD1-215ENST00000472096 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
CALD1-215ENST00000472096 A8MWL6 223 aa10.06□□□□□ -0.8
CALD1-215ENST00000472096 DNAJC30Q96LL9 226 aa10.06□□□□□ -0.8
CALD1-215ENST00000472096 TRAV8-3A0A0A6YYJ7 113 aa10.05□□□□□ -0.8
CALD1-215ENST00000472096 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
CALD1-215ENST00000472096 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
CALD1-215ENST00000472096 A0A087WX48 190 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 C9JQL5 133 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
CALD1-215ENST00000472096 FAM74A3Q4VXF1 159 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 TMEM97Q5BJF2 176 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 PGLYRP4Q96LB8 373 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
CALD1-215ENST00000472096 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 KCNIP4Q6PIL6 250 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 ISOC2Q96AB3 205 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
CALD1-215ENST00000472096 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
CALD1-215ENST00000472096 PKIAP61925 76 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.81
CALD1-215ENST00000472096 PEA15Q15121 130 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 MPV17L2Q567V2 206 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 CLRN3Q8NCR9 226 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 GFRA4Q9GZZ7 299 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
CALD1-215ENST00000472096 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 HIGD1CA8MV81 97 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 ELOBQ15370 118 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 C15orf54Q8N8G6 183 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 UBE2WQ96B02 151 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 NAT8Q9UHE5 227 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 V9GYV3 84 aa10.01□□□□□ -0.81
CALD1-215ENST00000472096 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
CALD1-215ENST00000472096 FAM231BA6NCW3 169 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms