RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 GAGE1Q13065 139 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 GAGE4Q13068 117 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 GAGE5Q13069 117 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 SERTAD4-AS1Q5TG53 156 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 NFE4Q86UQ8 179 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 BIN3Q9NQY0 253 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 MSRB1Q9NZV6 116 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 RYR1P21817 5038 aa7.5□□□□□ -1.21
COL4A6-205ENST00000468338 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
COL4A6-205ENST00000468338 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
COL4A6-205ENST00000468338 OR10J3Q5JRS4 329 aa7.5□□□□□ -1.21
COL4A6-205ENST00000468338 OR2D3Q8NGH3 330 aa7.5□□□□□ -1.21
COL4A6-205ENST00000468338 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 A0A087WWC5 75 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 GZMBP10144 247 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 UBE2D3P61077 147 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 UBE2D2P62837 147 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 OCC1Q8TAD7 63 aa7.49□□□□□ -1.21
COL4A6-205ENST00000468338 MUC21A0A0G2JKD1 596 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 MUC21A0A140T8X8 626 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 F2Z2F3 143 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 K7EN84 100 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 P01737 135 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 SPATA12Q7Z6I5 190 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
COL4A6-205ENST00000468338 XKRY2A2RUG3 117 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 USP17L23D6RBM5 183 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 CTRLP40313 264 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 CACNG7P62955 275 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 RPL36AP83881 106 aaKnown RBP7.47□□□□□ -1.21
COL4A6-205ENST00000468338 LAGE3Q14657 143 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 WDR73Q6P4I2 378 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 RPL36ALQ969Q0 106 aaKnown RBP7.47□□□□□ -1.21
COL4A6-205ENST00000468338 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 AP1S3Q96PC3 154 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 CNFNQ9BYD5 112 aa7.47□□□□□ -1.21
COL4A6-205ENST00000468338 A0A087WTM6 91 aa7.46□□□□□ -1.22
COL4A6-205ENST00000468338 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.22
COL4A6-205ENST00000468338 HSPG2P98160 4391 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
COL4A6-205ENST00000468338 IGHV3-30P01768 117 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 IGHV3-30-5P0DP03 117 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 FOXI1Q12951 378 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 ZNF56Q15929 161 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 NIT1Q86X76 327 aa7.45□□□□□ -1.22
COL4A6-205ENST00000468338 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
COL4A6-205ENST00000468338 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
COL4A6-205ENST00000468338 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 M0QY20 66 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 CDK2AP2O75956 126 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
COL4A6-205ENST00000468338 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 NTF3P20783 257 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 ERVFC1-1P60608 527 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 SSTP61278 116 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 TPPP3Q9BW30 176 aa7.44□□□□□ -1.22
COL4A6-205ENST00000468338 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
COL4A6-205ENST00000468338 TRGC1P0CF51 173 aa7.43□□□□□ -1.22
COL4A6-205ENST00000468338 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
COL4A6-205ENST00000468338 XP32Q5T750 250 aa7.43□□□□□ -1.22
COL4A6-205ENST00000468338 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
COL4A6-205ENST00000468338 DAZ4Q86SG3 579 aaKnown RBP7.43□□□□□ -1.22
COL4A6-205ENST00000468338 GTSF1Q8WW33 167 aa7.43□□□□□ -1.22
COL4A6-205ENST00000468338 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
COL4A6-205ENST00000468338 DAZ3Q9NR90 486 aaKnown RBP7.43□□□□□ -1.22
COL4A6-205ENST00000468338 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
COL4A6-205ENST00000468338 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
COL4A6-205ENST00000468338 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
COL4A6-205ENST00000468338 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
COL4A6-205ENST00000468338 SMIM7Q9BQ49 75 aa7.42□□□□□ -1.22
COL4A6-205ENST00000468338 H7C1H1 209 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 GATCO43716 136 aaKnown RBP7.41□□□□□ -1.22
COL4A6-205ENST00000468338 TMEM97Q5BJF2 176 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 TM2D2Q9BX73 214 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 Q9HAA7 133 aa7.41□□□□□ -1.22
COL4A6-205ENST00000468338 ZNF727A8MUV8 499 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 A8MWL6 223 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 C9JQL5 133 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 RASL11AQ6T310 242 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 ATRAIDQ6UW56 229 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 OSTCQ9NRP0 149 aa7.4□□□□□ -1.22
COL4A6-205ENST00000468338 A0A087WX48 190 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 FAM231BA6NCW3 169 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 MGPP08493 103 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms