RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 PLXNA1Q9UIW2 1896 aa-0.14□□□□□ -2.43
SATB1-211ENST00000467628 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
SATB1-211ENST00000467628 SPTBN1Q01082 2364 aaKnown RBP-0.14□□□□□ -2.43
SATB1-211ENST00000467628 GOLGA3Q08378 1498 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 TNS1Q9HBL0 1735 aaKnown RBP-0.15□□□□□ -2.43
SATB1-211ENST00000467628 ARHGEF10O15013 1369 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 TMEM2Q9UHN6 1383 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 MAP1BP46821 2468 aaKnown RBP-0.15□□□□□ -2.43
SATB1-211ENST00000467628 TRGV1A0A0A0MS02 117 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 TRBV7-1A0A0A6YYK4 115 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 LOC105371267A0A1B0GV96 52 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 TMEM14DPA8MWL7 114 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 ARPC5O15511 151 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 PIRTP0C851 137 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 COX4I1P13073 169 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 UBE2D1P51668 147 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 NCS1P62166 190 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 COX6A2Q02221 97 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 ALX1Q15699 326 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 C9orf116Q5BN46 136 aaPredicted RBP-0.15□□□□□ -2.43
SATB1-211ENST00000467628 SPANXN1Q5VSR9 72 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 SLC48A1Q6P1K1 146 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 SDF2Q99470 211 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 CYP4F30PQ9H0H9 118 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 V9GYV3 84 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 ZMYM4Q5VZL5 1548 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 SPTA1P02549 2419 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 ZANQ9Y493 2812 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 CHD8Q9HCK8 2581 aa-0.15□□□□□ -2.43
SATB1-211ENST00000467628 AKAP11Q9UKA4 1901 aa-0.16□□□□□ -2.43
SATB1-211ENST00000467628 APODP05090 189 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 EDDM3BP56851 147 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 CKS1BP61024 79 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 FAM74A4Q5TZK3 123 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 Q6ZUT4 128 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 C10orf82Q8WW14 230 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 BATF3Q9NR55 127 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 ZFHX3Q15911 3703 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 DAPK1P53355 1430 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 PKDREJQ9NTG1 2253 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 COL6A3P12111 3177 aa-0.16□□□□□ -2.44
SATB1-211ENST00000467628 TRBV10-3A0A0K0K1G6 114 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 FHAD1B1AJZ9 1412 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 NPFFO15130 113 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 ACYP2P14621 99 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 UBE2G1P62253 170 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 MUC2Q02817 5179 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 SCIMPQ6UWF3 145 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 ZNF818PQ6ZRF7 136 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 CTAGE3PQ8IX95 158 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 CNFNQ9BYD5 112 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 PDZD2O15018 2839 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 MUC22E2RYF6 1773 aaPredicted RBP-0.17□□□□□ -2.44
SATB1-211ENST00000467628 PXDNQ92626 1479 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 PHIPQ8WWQ0 1821 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 KIF13AQ9H1H9 1805 aa-0.17□□□□□ -2.44
SATB1-211ENST00000467628 DOPEY2Q9Y3R5 2298 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 SPAARA0A1B0GVQ0 90 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 M0R129 80 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 PIN1P1O15428 100 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 IFNA17P01571 189 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 CBLN1P23435 193 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 RRAS2P62070 204 aaPredicted RBP-0.18□□□□□ -2.44
SATB1-211ENST00000467628 CCL8P80075 99 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 SMIM21Q3B7S5 101 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 SSBP3-AS1Q7Z2R9 100 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 FAM213BQ8TBF2 198 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 DPH3Q96FX2 82 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 SMIM3Q9BZL3 60 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 RPRMQ9NS64 109 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 GSKIPQ9P0R6 139 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 SCP2D1Q9UJQ7 156 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 IFT140Q96RY7 1462 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 NRXN2Q9P2S2 1712 aa-0.18□□□□□ -2.44
SATB1-211ENST00000467628 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 PLCE1Q9P212 2302 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 SRRM2Q9UQ35 2752 aaKnown RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 EP300Q09472 2414 aaPredicted RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 ZNF815PA8K554 130 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 C10orf142B7Z368 130 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 APOC4-APOC2K7ER74 178 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 M0R2Z0 102 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 NDUFB6O95139 128 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 SPINK8P0C7L1 97 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 SPRR2DP22532 72 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 GCHFRP30047 84 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 CCL18P55774 89 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 RPS25P62851 125 aaKnown RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 ANP32BQ92688 251 aaKnown RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 TMEM191AQ9H0A3 160 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 ZNF518AQ6AHZ1 1483 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 PKHD1P08F94 4074 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 CEP152O94986 1710 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 SIPA1L3O60292 1781 aaPredicted RBP-0.19□□□□□ -2.44
SATB1-211ENST00000467628 ACANP16112 2415 aa-0.19□□□□□ -2.44
SATB1-211ENST00000467628 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 LRRC37A3O60309 1634 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 LAMC1P11047 1609 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 BIVM-ERCC5R4GMW8 1640 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms