RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
SATB1-211ENST00000467628 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
SATB1-211ENST00000467628 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
SATB1-211ENST00000467628 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
SATB1-211ENST00000467628 FOXD1Q16676 465 aa14.34□□□□□ -0.11
SATB1-211ENST00000467628 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
SATB1-211ENST00000467628 MSH5O43196 834 aa13.4□□□□□ -0.26
SATB1-211ENST00000467628 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
SATB1-211ENST00000467628 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
SATB1-211ENST00000467628 ADRA2BP18089 450 aa13.3□□□□□ -0.28
SATB1-211ENST00000467628 POTEDQ86YR6 584 aa13.3□□□□□ -0.28
SATB1-211ENST00000467628 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
SATB1-211ENST00000467628 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
SATB1-211ENST00000467628 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
SATB1-211ENST00000467628 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
SATB1-211ENST00000467628 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
SATB1-211ENST00000467628 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
SATB1-211ENST00000467628 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
SATB1-211ENST00000467628 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
SATB1-211ENST00000467628 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
SATB1-211ENST00000467628 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
SATB1-211ENST00000467628 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
SATB1-211ENST00000467628 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
SATB1-211ENST00000467628 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
SATB1-211ENST00000467628 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
SATB1-211ENST00000467628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
SATB1-211ENST00000467628 KCNA4P22459 653 aa10.91□□□□□ -0.66
SATB1-211ENST00000467628 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
SATB1-211ENST00000467628 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
SATB1-211ENST00000467628 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
SATB1-211ENST00000467628 CAPN15O75808 1086 aa10.71□□□□□ -0.69
SATB1-211ENST00000467628 DSG3P32926 999 aa10.71□□□□□ -0.69
SATB1-211ENST00000467628 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
SATB1-211ENST00000467628 ABCB7O75027 752 aa10.48□□□□□ -0.73
SATB1-211ENST00000467628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
SATB1-211ENST00000467628 APLP2Q06481 763 aa10.47□□□□□ -0.73
SATB1-211ENST00000467628 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
SATB1-211ENST00000467628 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
SATB1-211ENST00000467628 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
SATB1-211ENST00000467628 POTEHQ6S545 545 aa10.38□□□□□ -0.75
SATB1-211ENST00000467628 MYCNP04198 464 aaPredicted RBP10.32□□□□□ -0.76
SATB1-211ENST00000467628 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
SATB1-211ENST00000467628 POLA2Q14181 598 aa10.23□□□□□ -0.77
SATB1-211ENST00000467628 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
SATB1-211ENST00000467628 ATF5Q9Y2D1 282 aaPredicted RBP10.17□□□□□ -0.78
SATB1-211ENST00000467628 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
SATB1-211ENST00000467628 ZBTB22O15209 634 aa10.06□□□□□ -0.8
SATB1-211ENST00000467628 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
SATB1-211ENST00000467628 ZBTB12Q9Y330 459 aaPredicted RBP9.95□□□□□ -0.82
SATB1-211ENST00000467628 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
SATB1-211ENST00000467628 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
SATB1-211ENST00000467628 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
SATB1-211ENST00000467628 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
SATB1-211ENST00000467628 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.85
SATB1-211ENST00000467628 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
SATB1-211ENST00000467628 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
SATB1-211ENST00000467628 FBLN2P98095 1184 aa9.68□□□□□ -0.86
SATB1-211ENST00000467628 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
SATB1-211ENST00000467628 SP7Q8TDD2 431 aaPredicted RBP9.68□□□□□ -0.86
SATB1-211ENST00000467628 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
SATB1-211ENST00000467628 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
SATB1-211ENST00000467628 SPDYE2Q495Y8 402 aa9.67□□□□□ -0.86
SATB1-211ENST00000467628 HAX1O00165 279 aa9.59□□□□□ -0.87
SATB1-211ENST00000467628 SSUH2Q9Y2M2 353 aa9.56□□□□□ -0.88
SATB1-211ENST00000467628 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
SATB1-211ENST00000467628 EVX2Q03828 476 aa9.54□□□□□ -0.88
SATB1-211ENST00000467628 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.89
SATB1-211ENST00000467628 CLEC11AQ9Y240 323 aa9.52□□□□□ -0.89
SATB1-211ENST00000467628 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
SATB1-211ENST00000467628 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
SATB1-211ENST00000467628 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
SATB1-211ENST00000467628 CHADLQ6NUI6 762 aa9.39□□□□□ -0.91
SATB1-211ENST00000467628 C19orf67A6NJJ6 358 aa9.38□□□□□ -0.91
SATB1-211ENST00000467628 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
SATB1-211ENST00000467628 EHMT2Q96KQ7 1210 aa9.28□□□□□ -0.92
SATB1-211ENST00000467628 GABBR2O75899 941 aa9.27□□□□□ -0.93
SATB1-211ENST00000467628 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
SATB1-211ENST00000467628 CD44P16070 742 aaKnown RBP9.18□□□□□ -0.94
SATB1-211ENST00000467628 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
SATB1-211ENST00000467628 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
SATB1-211ENST00000467628 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
SATB1-211ENST00000467628 LHX8Q68G74 356 aa9.09□□□□□ -0.95
SATB1-211ENST00000467628 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
SATB1-211ENST00000467628 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
SATB1-211ENST00000467628 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
SATB1-211ENST00000467628 CLCN6P51797 869 aa9.03□□□□□ -0.96
SATB1-211ENST00000467628 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
SATB1-211ENST00000467628 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
SATB1-211ENST00000467628 DCBLD2Q96PD2 775 aa8.96□□□□□ -0.98
SATB1-211ENST00000467628 PROM2Q8N271 834 aa8.92□□□□□ -0.98
SATB1-211ENST00000467628 PHF12Q96QT6 1004 aa8.92□□□□□ -0.98
SATB1-211ENST00000467628 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
SATB1-211ENST00000467628 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
SATB1-211ENST00000467628 POTEB2H3BUK9 544 aa8.82□□□□□ -1
SATB1-211ENST00000467628 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
SATB1-211ENST00000467628 MS4A3Q96HJ5 214 aa8.79□□□□□ -1
SATB1-211ENST00000467628 OTUD5Q96G74 571 aa8.78□□□□□ -1
SATB1-211ENST00000467628 TSPYL2Q9H2G4 693 aaPredicted RBP8.78□□□□□ -1
SATB1-211ENST00000467628 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
SATB1-211ENST00000467628 CCDC61Q9Y6R9 512 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms