RNA–Protein interactions for RNA: ENST00000458511.6

TRAPPC2-204, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5 BASIC

Gene TRAPPC2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-204ENST00000458511 PMCHP20382 165 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 SRIP30626 198 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 TWIST1Q15672 202 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 PRR9Q5T870 116 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 FAM104BQ5XKR9 115 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 AMTNQ6UX39 209 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 Q6ZRP5 223 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 C18orf32Q8TCD1 76 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 LINC00467Q9BRT7 94 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 PPDPFQ9H3Y8 114 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 TP53TG3Q9ULZ0 132 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 ZNF256Q9Y2P7 627 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 LAMTOR2Q9Y2Q5 125 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 U3KQK5 164 aa3.92□□□□□ -1.78
TRAPPC2-204ENST00000458511 TMSB15BA0A087X1C1 80 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 IGHV3-38A0A0C4DH36 116 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 H3BMM0 161 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 IGLV1-51P01701 117 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 ZNF705DP0CH99 300 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 ZNF705BP0CI00 300 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 NTF3P20783 257 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 RNASE4P34096 147 aaKnown RBP3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 ASIPP42127 132 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 TFPI2P48307 235 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 INSL3P51460 131 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 AKR1D1P51857 326 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 DEFB131AP59861 70 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 GFI1BQ5VTD9 330 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 BAGE3Q86Y29 109 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 DEFB125Q8N687 156 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 DUX3Q96PT4 197 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 HIST1H2BLQ99880 126 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 RETNQ9HD89 108 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 CMYA5Q8N3K9 4069 aa3.91□□□□□ -1.78
TRAPPC2-204ENST00000458511 TEX48A0A1B0GUV7 120 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 GRIFINA4D1Z8 144 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 SERF1AO75920 110 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 DEFB1P60022 68 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 KRTAP10-3P60369 221 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 JOSD1Q15040 202 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 BOD1L2Q8IYS8 172 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 ORMDL3Q8N138 153 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 TMEM256Q8N2U0 113 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 POM121L12Q8N7R1 296 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 C11orf45Q8TAV5 145 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 PTH2Q96A98 100 aa3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 FBN1P35555 2871 aaKnown RBP3.9□□□□□ -1.79
TRAPPC2-204ENST00000458511 SVEP1Q4LDE5 3571 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 ATRQ13535 2644 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 TRAV12-3A0A0B4J271 114 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 IGHV3-16A0A0C4DH30 117 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 LINC01546A6NGU7 62 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 OR11H12B2RN74 326 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 H3BVH4 76 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 M0R381 172 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 CRXO43186 299 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 NUPR1O60356 82 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 PPP1R17O96001 155 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 LINC00614P0C842 121 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 PRB4P10163 310 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 RNASE3P12724 160 aaKnown RBP3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 FABP4P15090 132 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 S100A4P26447 101 aaKnown RBP3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 MRPL51Q4U2R6 128 aaKnown RBP3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 SPANXN1Q5VSR9 72 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 NIT1Q86X76 327 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 OR10D4PQ8NGN7 298 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 RNF185Q96GF1 192 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 PHLDA3Q9Y5J5 127 aa3.89□□□□□ -1.79
TRAPPC2-204ENST00000458511 NOTCH3Q9UM47 2321 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 COL6A5A8TX70 2615 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 RBMY1BA6NDE4 496 aaKnown RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 RBMY1EA6NEQ0 496 aaKnown RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 KNCNA6PVL3 124 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 D6R8Y8 96 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 K7EMI3 77 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 GNRH2O43555 120 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 CD7P09564 240 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 RBMY1DP0C7P1 496 aaKnown RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 CKS2P33552 79 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 NUTF2P61970 127 aaKnown RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 SPINK13Q1W4C9 94 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 NSUN5P1Q3KNT7 163 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 MORN3Q6PF18 240 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 Q6ZQT7 251 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 AMN1Q8IY45 258 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 PRELID3AQ96N28 172 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 AP1S3Q96PC3 154 aa3.88□□□□□ -1.79
TRAPPC2-204ENST00000458511 C12orf57Q99622 126 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms