RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TNP2Q05952 138 aa15□□□□□ -0.01
C9orf3-208ENST00000451893 SLAQ13239 276 aa15□□□□□ -0.01
C9orf3-208ENST00000451893 ESRGQ1W209 222 aa15□□□□□ -0.01
C9orf3-208ENST00000451893 ICOSQ9Y6W8 199 aa15□□□□□ -0.01
C9orf3-208ENST00000451893 C16orf90A8MZG2 172 aa14.99□□□□□ -0.01
C9orf3-208ENST00000451893 COA6Q5JTJ3 125 aaKnown RBP14.99□□□□□ -0.01
C9orf3-208ENST00000451893 C18orf15Q96N68 181 aa14.99□□□□□ -0.01
C9orf3-208ENST00000451893 SPXQ9BT56 116 aa14.99□□□□□ -0.01
C9orf3-208ENST00000451893 MRPS16Q9Y3D3 137 aaKnown RBP14.99□□□□□ -0.01
C9orf3-208ENST00000451893 PPBPP02775 128 aa14.98□□□□□ -0.01
C9orf3-208ENST00000451893 Q0VG73 95 aa14.98□□□□□ -0.01
C9orf3-208ENST00000451893 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
C9orf3-208ENST00000451893 UPK3BQ9BT76 320 aa14.98□□□□□ -0.01
C9orf3-208ENST00000451893 HERC2O95714 4834 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 MUC4Q99102 2169 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 TRGV4A0A0C4DH28 118 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 MUC21A0A0G2JKD1 596 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 MUC21A0A140T8X8 626 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 NDUFA6P56556 154 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 MDFICQ9P1T7 246 aa14.97□□□□□ -0.01
C9orf3-208ENST00000451893 A0A096LPF7 62 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 C5orf52A6NGY3 159 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 VSIG2Q96IQ7 327 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 AP1S3Q96PC3 154 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 ALKBH7Q9BT30 221 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-208ENST00000451893 MSRB1Q9NZV6 116 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 PRO0255Q9UI72 69 aa14.96□□□□□ -0.01
C9orf3-208ENST00000451893 M0R381 172 aa14.95□□□□□ -0.02
C9orf3-208ENST00000451893 SSTP61278 116 aa14.95□□□□□ -0.02
C9orf3-208ENST00000451893 KIAA1644Q3SXP7 199 aa14.95□□□□□ -0.02
C9orf3-208ENST00000451893 SRIP30626 198 aa14.94□□□□□ -0.02
C9orf3-208ENST00000451893 DPH3P1Q9H4G8 78 aa14.94□□□□□ -0.02
C9orf3-208ENST00000451893 HHLA3Q9XRX5 114 aa14.94□□□□□ -0.02
C9orf3-208ENST00000451893 DNAH17Q9UFH2 4485 aa14.94□□□□□ -0.02
C9orf3-208ENST00000451893 DNAH2Q9P225 4427 aa14.94□□□□□ -0.02
C9orf3-208ENST00000451893 FAT2Q9NYQ8 4349 aa14.93□□□□□ -0.02
C9orf3-208ENST00000451893 M0R2P5 195 aa14.93□□□□□ -0.02
C9orf3-208ENST00000451893 RAB4AP20338 218 aa14.93□□□□□ -0.02
C9orf3-208ENST00000451893 SNRPEP62304 92 aaKnown RBP14.93□□□□□ -0.02
C9orf3-208ENST00000451893 AMN1Q8IY45 258 aa14.93□□□□□ -0.02
C9orf3-208ENST00000451893 LAMTOR2Q9Y2Q5 125 aa14.93□□□□□ -0.02
C9orf3-208ENST00000451893 KIAA1109Q2LD37 5005 aa14.92□□□□□ -0.02
C9orf3-208ENST00000451893 SIVA1O15304 175 aa14.92□□□□□ -0.02
C9orf3-208ENST00000451893 SMIM17P0DL12 118 aa14.92□□□□□ -0.02
C9orf3-208ENST00000451893 EVI2AP22794 236 aa14.92□□□□□ -0.02
C9orf3-208ENST00000451893 MRPL23Q16540 153 aaKnown RBP14.92□□□□□ -0.02
C9orf3-208ENST00000451893 MRPL51Q4U2R6 128 aaKnown RBP14.92□□□□□ -0.02
C9orf3-208ENST00000451893 ORMDL3Q8N138 153 aa14.92□□□□□ -0.02
C9orf3-208ENST00000451893 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
C9orf3-208ENST00000451893 RNF185Q96GF1 192 aa14.91□□□□□ -0.02
C9orf3-208ENST00000451893 KRTAP17-1Q9BYP8 105 aa14.91□□□□□ -0.02
C9orf3-208ENST00000451893 CKS2P33552 79 aa14.9□□□□□ -0.02
C9orf3-208ENST00000451893 CRYBA4P53673 196 aa14.9□□□□□ -0.02
C9orf3-208ENST00000451893 ZNF876PQ49A33 203 aa14.9□□□□□ -0.02
C9orf3-208ENST00000451893 BAGE3Q86Y29 109 aa14.9□□□□□ -0.02
C9orf3-208ENST00000451893 PKHD1P08F94 4074 aa14.89□□□□□ -0.03
C9orf3-208ENST00000451893 PPP1R17O96001 155 aa14.89□□□□□ -0.03
C9orf3-208ENST00000451893 C18orf32Q8TCD1 76 aa14.89□□□□□ -0.03
C9orf3-208ENST00000451893 A8MWV9 139 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 FHL2Q14192 279 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 NEGR1Q7Z3B1 354 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 SPATA12Q7Z6I5 190 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 PRELID3AQ96N28 172 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 KRTAP1-5Q9BYS1 174 aa14.88□□□□□ -0.03
C9orf3-208ENST00000451893 D6R8Y8 96 aa14.87□□□□□ -0.03
C9orf3-208ENST00000451893 ESDP10768 282 aa14.87□□□□□ -0.03
C9orf3-208ENST00000451893 BTF3P20290 206 aaKnown RBP14.87□□□□□ -0.03
C9orf3-208ENST00000451893 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-208ENST00000451893 OR4C5Q8NGB2 326 aa14.87□□□□□ -0.03
C9orf3-208ENST00000451893 RASL10AQ92737 203 aa14.87□□□□□ -0.03
C9orf3-208ENST00000451893 KIF25-AS1Q9Y6Z4 181 aa14.87□□□□□ -0.03
C9orf3-208ENST00000451893 LOC105371267A0A1B0GV96 52 aa14.86□□□□□ -0.03
C9orf3-208ENST00000451893 ZNF479Q96JC4 524 aa14.86□□□□□ -0.03
C9orf3-208ENST00000451893 TRAV9-2A0A087WT02 112 aa14.85□□□□□ -0.03
C9orf3-208ENST00000451893 EREGO14944 169 aa14.85□□□□□ -0.03
C9orf3-208ENST00000451893 GYPEP15421 78 aa14.85□□□□□ -0.03
C9orf3-208ENST00000451893 LINC00315P59091 139 aa14.85□□□□□ -0.03
C9orf3-208ENST00000451893 TRAV4A0A0B4J268 109 aa14.84□□□□□ -0.03
C9orf3-208ENST00000451893 S100A2P29034 98 aa14.84□□□□□ -0.03
C9orf3-208ENST00000451893 LYPD5Q6UWN5 251 aa14.84□□□□□ -0.03
C9orf3-208ENST00000451893 HIST3H2BBQ8N257 126 aa14.84□□□□□ -0.03
C9orf3-208ENST00000451893 PRSS47A8MTI9 375 aa14.83□□□□□ -0.04
C9orf3-208ENST00000451893 CIDEAO60543 219 aa14.83□□□□□ -0.04
C9orf3-208ENST00000451893 CRYGDP07320 174 aa14.83□□□□□ -0.04
C9orf3-208ENST00000451893 CHCHD1Q96BP2 118 aaKnown RBP14.83□□□□□ -0.04
C9orf3-208ENST00000451893 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-208ENST00000451893 K7EQD1 137 aa14.82□□□□□ -0.04
C9orf3-208ENST00000451893 RHODO00212 210 aa14.82□□□□□ -0.04
C9orf3-208ENST00000451893 PKD1P98161 4303 aa14.82□□□□□ -0.04
C9orf3-208ENST00000451893 SERF1AO75920 110 aa14.81□□□□□ -0.04
C9orf3-208ENST00000451893 TNFRSF6BO95407 300 aa14.81□□□□□ -0.04
C9orf3-208ENST00000451893 ZFP2Q6ZN57 461 aa14.81□□□□□ -0.04
C9orf3-208ENST00000451893 NIT1Q86X76 327 aa14.81□□□□□ -0.04
C9orf3-208ENST00000451893 MAP1LC3AQ9H492 121 aa14.81□□□□□ -0.04
C9orf3-208ENST00000451893 RS1O15537 224 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 MGPP08493 103 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 LINC00614P0C842 121 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 PMCHP20382 165 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 NFE4Q86UQ8 179 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 PRSS3P2Q8NHM4 247 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms