RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 URGCP-MRPS24S4R325 110 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DNAH17Q9UFH2 4485 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LINC00315P59091 139 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TWIST1Q15672 202 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 ADIRFQ15847 76 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TMEM97Q5BJF2 176 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 OR10G8Q8NGN5 311 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 CNFNQ9BYD5 112 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DPH3P1Q9H4G8 78 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 NAT8Q9UHE5 227 aa7.06□□□□□ -1.28
HLA-DQB1-206ENST00000443574 NTF3P20783 257 aa7.05□□□□□ -1.28
HLA-DQB1-206ENST00000443574 GFRA4Q9GZZ7 299 aa7.05□□□□□ -1.28
HLA-DQB1-206ENST00000443574 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
HLA-DQB1-206ENST00000443574 FAM231BA6NCW3 169 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 UBE2D3P61077 147 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 PKIAP61925 76 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 UBE2D2P62837 147 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LAGE3Q14657 143 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 NEXN-AS1Q8NBZ9 246 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 MSRB1Q9NZV6 116 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TNFRSF18Q9Y5U5 241 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 KIF25-AS1Q9Y6Z4 181 aa7.04□□□□□ -1.28
HLA-DQB1-206ENST00000443574 A0A087WX48 190 aa7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 RPL23P62829 140 aaKnown RBP7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 RASL11AQ6T310 242 aa7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 GTSF1Q8WW33 167 aa7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 ISOC2Q96AB3 205 aa7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
HLA-DQB1-206ENST00000443574 A0A1B0GUT8 65 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 HIGD1CA8MV81 97 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PSCAO43653 123 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IGHV3-33P01772 117 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IGHV3-30-3P0DP02 117 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 ELOBQ15370 118 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 CLLU1Q5K131 121 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 FRZBQ92765 325 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PGLYRP4Q96LB8 373 aa7.02□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PKD1P98161 4303 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IBA57-AS1B1ANH7 110 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 M0QY20 66 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 NIT2Q9NQR4 276 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 Q9UF83 564 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 BIRC6Q9NR09 4857 aa7.01□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TRAV8-3A0A0A6YYJ7 113 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 C9JQL5 133 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PNRC1Q12796 327 aaPredicted RBP7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 RIGQ13278 110 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 NIT1Q86X76 327 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 RMI2Q96E14 147 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 CHCHD5Q9BSY4 110 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TM2D2Q9BX73 214 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 Q9HAA7 133 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 V9GYV3 84 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PKHD1P08F94 4074 aa7□□□□□ -1.29
HLA-DQB1-206ENST00000443574 CRPP02741 224 aa6.99□□□□□ -1.29
HLA-DQB1-206ENST00000443574 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
HLA-DQB1-206ENST00000443574 COX11Q9Y6N1 276 aa6.99□□□□□ -1.29
HLA-DQB1-206ENST00000443574 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 A0A1B0GW15 77 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TMEM262E9PQX1 116 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 PPP1R2P9O14990 202 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 S100A8P05109 93 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TMEM191AQ9H0A3 160 aa6.98□□□□□ -1.29
HLA-DQB1-206ENST00000443574 C16orf90A8MZG2 172 aa6.97□□□□□ -1.29
HLA-DQB1-206ENST00000443574 UBE2L6O14933 153 aa6.97□□□□□ -1.29
HLA-DQB1-206ENST00000443574 COTL1Q14019 142 aa6.97□□□□□ -1.29
HLA-DQB1-206ENST00000443574 UQCC3Q6UW78 93 aa6.97□□□□□ -1.29
HLA-DQB1-206ENST00000443574 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
HLA-DQB1-206ENST00000443574 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 PPP1R17O96001 155 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 Q0VG73 95 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 IQCJQ1A5X6 159 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 GATD1Q8NB37 220 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 KLK12Q9UKR0 248 aa6.96□□□□□ -1.3
HLA-DQB1-206ENST00000443574 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 NCR2O95944 276 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 MT-ND4LP03901 98 aa6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
HLA-DQB1-206ENST00000443574 AMTP48728 403 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms