RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 TET3O43151 1660 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 KDM5AP29375 1690 aaKnown RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 DSPP15924 2871 aaKnown RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 REV3LO60673 3130 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 CHD1O14646 1710 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 KIAA1551Q9HCM1 1747 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 ZNF292O60281 2723 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 ZFHX3Q15911 3703 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 LAMB1P07942 1786 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 CLASP1Q7Z460 1538 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 GVQW2A0A096LPI5 108 aaPredicted RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 M0R129 80 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 NPC2P61916 151 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 COX7B2Q8TF08 81 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 V9GYV3 84 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 LAMA3Q16787 3333 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 PRUNE2Q8WUY3 3088 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 LAMA2P24043 3122 aaKnown RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 CEP170BQ9Y4F5 1589 aaPredicted RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 NESP48681 1621 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 TARBP1Q13395 1621 aaKnown RBP0.05□□□□□ -2.4
SCG2-203ENST00000433889 DCHS1Q96JQ0 3298 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 BPTFQ12830 3046 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 TGP01266 2768 aa0.05□□□□□ -2.4
SCG2-203ENST00000433889 EPG5Q9HCE0 2579 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 BIRC6Q9NR09 4857 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 NUP188Q5SRE5 1749 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 KNDC1Q76NI1 1749 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 NBEAQ8NFP9 2946 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 PTPRMP28827 1452 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 SHANK2Q9UPX8 1470 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 FLNCQ14315 2725 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 MAPKBP1O60336 1514 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 LRP1BQ9NZR2 4599 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 LAMA1P25391 3075 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 CFAP54Q96N23 3096 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 SYNJ1O43426 1573 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 DIP2BQ9P265 1576 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 TRAV12-3A0A0B4J271 114 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 A6NIN4 97 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 CCL3L1P16619 93 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 PYDC1Q8WXC3 89 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 LZICQ8WZA0 190 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 CHD9Q3L8U1 2897 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 LAMC1P11047 1609 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 CSMD1Q96PZ7 3565 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 CC2D2AQ9P2K1 1620 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 RYR1P21817 5038 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 COL4A6Q14031 1691 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 KIAA1109Q2LD37 5005 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 SPHKAPQ2M3C7 1700 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 HTTP42858 3142 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 HERC1Q15751 4861 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 WDFY3Q8IZQ1 3526 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 KDM3BQ7LBC6 1761 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 SRCAPQ6ZRS2 3230 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 WDR87Q6ZQQ6 2873 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 LRP2P98164 4655 aa0.04□□□□□ -2.4
SCG2-203ENST00000433889 DYNC2H1Q8NCM8 4307 aaKnown RBP0.04□□□□□ -2.4
SCG2-203ENST00000433889 MYO18BQ8IUG5 2567 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ERCC6Q03468 1493 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 CHD7Q9P2D1 2997 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 COL6A5A8TX70 2615 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 EFCAB6Q5THR3 1501 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ZMYM4Q5VZL5 1548 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 SACSQ9NZJ4 4579 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.4
SCG2-203ENST00000433889 PKD1L1Q8TDX9 2849 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 MXRA5Q9NR99 2828 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 KIF21BO75037 1637 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 LAMA5O15230 3695 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 MYOM1P52179 1685 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 VCANP13611 3396 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 TRBV20-1A0A075B6N2 111 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 J3QR89 54 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ZZEF1O43149 2961 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 KALRNO60229 2985 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 NCR2O95944 276 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 GCHFRP30047 84 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 KRTAP20-1Q3LI63 56 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 SMIM3Q9BZL3 60 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 SAR1AQ9NR31 198 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 U3KQA8 63 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 PHLPP1O60346 1717 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ABCA3Q99758 1704 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 NRXN2Q9P2S2 1712 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ANKRD26Q9UPS8 1709 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 MARF1Q9Y4F3 1742 aaKnown RBP0.03□□□□□ -2.4
SCG2-203ENST00000433889 DMXL1Q9Y485 3027 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 FAT2Q9NYQ8 4349 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 TEP1Q99973 2627 aaKnown RBP0.03□□□□□ -2.4
SCG2-203ENST00000433889 SCN11AQ9UI33 1791 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 ITPR3Q14573 2671 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 DNAH11Q96DT5 4516 aa0.03□□□□□ -2.4
SCG2-203ENST00000433889 CUBNO60494 3623 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms