RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
SCG2-203ENST00000433889 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
SCG2-203ENST00000433889 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
SCG2-203ENST00000433889 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SCG2-203ENST00000433889 FOXD1Q16676 465 aa16.25■□□□□ 0.19
SCG2-203ENST00000433889 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
SCG2-203ENST00000433889 MSH5O43196 834 aa15.21■□□□□ 0.03
SCG2-203ENST00000433889 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
SCG2-203ENST00000433889 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
SCG2-203ENST00000433889 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
SCG2-203ENST00000433889 ADRA2BP18089 450 aa14.96□□□□□ -0.01
SCG2-203ENST00000433889 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
SCG2-203ENST00000433889 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
SCG2-203ENST00000433889 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
SCG2-203ENST00000433889 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
SCG2-203ENST00000433889 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
SCG2-203ENST00000433889 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
SCG2-203ENST00000433889 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
SCG2-203ENST00000433889 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
SCG2-203ENST00000433889 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
SCG2-203ENST00000433889 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
SCG2-203ENST00000433889 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
SCG2-203ENST00000433889 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
SCG2-203ENST00000433889 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
SCG2-203ENST00000433889 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
SCG2-203ENST00000433889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCG2-203ENST00000433889 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
SCG2-203ENST00000433889 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
SCG2-203ENST00000433889 DSG3P32926 999 aa12.11□□□□□ -0.47
SCG2-203ENST00000433889 CAPN15O75808 1086 aa12.08□□□□□ -0.48
SCG2-203ENST00000433889 KCNA4P22459 653 aa12.04□□□□□ -0.48
SCG2-203ENST00000433889 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
SCG2-203ENST00000433889 POTEHQ6S545 545 aa11.94□□□□□ -0.5
SCG2-203ENST00000433889 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
SCG2-203ENST00000433889 ABCB7O75027 752 aa11.83□□□□□ -0.52
SCG2-203ENST00000433889 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
SCG2-203ENST00000433889 APLP2Q06481 763 aa11.74□□□□□ -0.53
SCG2-203ENST00000433889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
SCG2-203ENST00000433889 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
SCG2-203ENST00000433889 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
SCG2-203ENST00000433889 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
SCG2-203ENST00000433889 POLA2Q14181 598 aa11.48□□□□□ -0.57
SCG2-203ENST00000433889 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
SCG2-203ENST00000433889 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
SCG2-203ENST00000433889 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
SCG2-203ENST00000433889 SLC4A1APQ9BWU0 796 aaKnown RBP11.27□□□□□ -0.61
SCG2-203ENST00000433889 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
SCG2-203ENST00000433889 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
SCG2-203ENST00000433889 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
SCG2-203ENST00000433889 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
SCG2-203ENST00000433889 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
SCG2-203ENST00000433889 ZBTB22O15209 634 aa11.1□□□□□ -0.63
SCG2-203ENST00000433889 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
SCG2-203ENST00000433889 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
SCG2-203ENST00000433889 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
SCG2-203ENST00000433889 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
SCG2-203ENST00000433889 HAX1O00165 279 aa10.91□□□□□ -0.66
SCG2-203ENST00000433889 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
SCG2-203ENST00000433889 EVX2Q03828 476 aa10.85□□□□□ -0.67
SCG2-203ENST00000433889 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
SCG2-203ENST00000433889 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
SCG2-203ENST00000433889 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
SCG2-203ENST00000433889 FBLN2P98095 1184 aa10.8□□□□□ -0.68
SCG2-203ENST00000433889 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
SCG2-203ENST00000433889 PRKAR2AP13861 404 aaKnown RBP10.71□□□□□ -0.69
SCG2-203ENST00000433889 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.69
SCG2-203ENST00000433889 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
SCG2-203ENST00000433889 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
SCG2-203ENST00000433889 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
SCG2-203ENST00000433889 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
SCG2-203ENST00000433889 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
SCG2-203ENST00000433889 GABBR2O75899 941 aa10.53□□□□□ -0.72
SCG2-203ENST00000433889 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
SCG2-203ENST00000433889 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
SCG2-203ENST00000433889 LHX8Q68G74 356 aa10.38□□□□□ -0.75
SCG2-203ENST00000433889 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
SCG2-203ENST00000433889 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
SCG2-203ENST00000433889 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
SCG2-203ENST00000433889 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
SCG2-203ENST00000433889 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
SCG2-203ENST00000433889 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
SCG2-203ENST00000433889 CLCN6P51797 869 aa10.18□□□□□ -0.78
SCG2-203ENST00000433889 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
SCG2-203ENST00000433889 DCBLD2Q96PD2 775 aa10.15□□□□□ -0.78
SCG2-203ENST00000433889 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
SCG2-203ENST00000433889 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
SCG2-203ENST00000433889 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
SCG2-203ENST00000433889 EHMT2Q96KQ7 1210 aa10.05□□□□□ -0.8
SCG2-203ENST00000433889 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
SCG2-203ENST00000433889 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
SCG2-203ENST00000433889 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
SCG2-203ENST00000433889 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
SCG2-203ENST00000433889 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
SCG2-203ENST00000433889 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
SCG2-203ENST00000433889 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
SCG2-203ENST00000433889 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
SCG2-203ENST00000433889 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
SCG2-203ENST00000433889 ASTLQ6HA08 431 aaPredicted RBP9.86□□□□□ -0.83
SCG2-203ENST00000433889 PROM2Q8N271 834 aa9.86□□□□□ -0.83
SCG2-203ENST00000433889 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms