RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 SPTSSAQ969W0 71 aa0.02□□□□□ -2.41
GCFC2-203ENST00000427862 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
GCFC2-203ENST00000427862 HRNRQ86YZ3 2850 aaPredicted RBP0.02□□□□□ -2.41
GCFC2-203ENST00000427862 ANK2Q01484 3957 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 DOCK11Q5JSL3 2073 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 LRP1Q07954 4544 aaKnown RBP0.01□□□□□ -2.41
GCFC2-203ENST00000427862 CLPSL1A2RUU4 121 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 NDUFB6O95139 128 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 CBLN1P23435 193 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 COPZ1P61923 177 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 RPS25P62851 125 aaKnown RBP0.01□□□□□ -2.41
GCFC2-203ENST00000427862 ZNF818PQ6ZRF7 136 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 WFDC6Q9BQY6 131 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 U3KQA8 63 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 ADGRB1O14514 1584 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 AHCTF1Q8WYP5 2266 aa0.01□□□□□ -2.41
GCFC2-203ENST00000427862 SNCGO76070 127 aa0□□□□□ -2.41
GCFC2-203ENST00000427862 KCNRGQ8N5I3 272 aa0□□□□□ -2.41
GCFC2-203ENST00000427862 TCEAL4Q96EI5 215 aa0□□□□□ -2.41
GCFC2-203ENST00000427862 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
GCFC2-203ENST00000427862 TPT1P8Q9HAU6 139 aa0□□□□□ -2.41
GCFC2-203ENST00000427862 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 APOC4-APOC2K7ER74 178 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 SMCO1Q147U7 214 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 UBE2DNLQ8IWF7 75 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 PFDN5Q99471 154 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 TMEM191AQ9H0A3 160 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 COL7A1Q02388 2944 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 CELSR2Q9HCU4 2923 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 CDK5RAP2Q96SN8 1893 aa-0.01□□□□□ -2.41
GCFC2-203ENST00000427862 PCLOQ9Y6V0 5065 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 MUC12Q9UKN1 5478 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 Q5VV11 94 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 SPTSSBQ8NFR3 76 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 SDF2Q99470 211 aa-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
GCFC2-203ENST00000427862 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 KRTAP20-1Q3LI63 56 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 CCDC167Q9P0B6 97 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 PAIP2BQ9ULR5 123 aaKnown RBP-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 SPTBN2O15020 2390 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 RYR1P21817 5038 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 PLXNA1Q9UIW2 1896 aa-0.03□□□□□ -2.41
GCFC2-203ENST00000427862 TRAV1-2A0A0B4J238 106 aa-0.04□□□□□ -2.42
GCFC2-203ENST00000427862 TRBV10-3A0A0K0K1G6 114 aa-0.04□□□□□ -2.42
GCFC2-203ENST00000427862 SMIM6P0DI80 62 aa-0.04□□□□□ -2.42
GCFC2-203ENST00000427862 CCL8P80075 99 aa-0.04□□□□□ -2.42
GCFC2-203ENST00000427862 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
GCFC2-203ENST00000427862 PHIPQ8WWQ0 1821 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 FAM92AA1XBS5 289 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 G3V318 75 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 PIN1P1O15428 100 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 MT4P47944 62 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 S100A7L2Q5SY68 101 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 SSBP3-AS1Q7Z2R9 100 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 BAGE3Q86Y29 109 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 USH2AO75445 5202 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 CEP152O94986 1710 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 NRXN2Q9P2S2 1712 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 MYH13Q9UKX3 1938 aa-0.05□□□□□ -2.42
GCFC2-203ENST00000427862 UBR4Q5T4S7 5183 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 ZNF815PA8K554 130 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 DPH3Q96FX2 82 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 SEC11CQ9BY50 192 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 LINC00312Q9Y6C7 94 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 GOLGA3Q08378 1498 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 RNF213Q63HN8 5207 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 KMT2CQ8NEZ4 4911 aaKnown RBP-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 ABCA2Q9BZC7 2435 aa-0.06□□□□□ -2.42
GCFC2-203ENST00000427862 ZMYM4Q5VZL5 1548 aa-0.07□□□□□ -2.42
GCFC2-203ENST00000427862 RYR2Q92736 4967 aa-0.07□□□□□ -2.42
GCFC2-203ENST00000427862 LAMB1P07942 1786 aa-0.07□□□□□ -2.42
GCFC2-203ENST00000427862 TENM4Q6N022 2769 aa-0.07□□□□□ -2.42
GCFC2-203ENST00000427862 UNC13AQ9UPW8 1703 aa-0.07□□□□□ -2.42
GCFC2-203ENST00000427862 HMCN2Q8NDA2 5059 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 KIAA1109Q2LD37 5005 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 ZNF518AQ6AHZ1 1483 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 IFT140Q96RY7 1462 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 AKAP11Q9UKA4 1901 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 A0A0D9SFI3 127 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 SPINK8P0C7L1 97 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 IFITM1P13164 125 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 SPRR2EP22531 72 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 SPRR2DP22532 72 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 KRTAP19-6Q3LI70 58 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 CYP4F30PQ9H0H9 118 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 HYDINQ4G0P3 5121 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 STAB1Q9NY15 2570 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 CELSR1Q9NYQ6 3014 aa-0.08□□□□□ -2.42
GCFC2-203ENST00000427862 MUC22E2RYF6 1773 aaPredicted RBP-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 EPPK1P58107 5090 aaKnown RBP-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 SPTBN4Q9H254 2564 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 PIGBOS1A0A0B4J2F0 54 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 SIX6O95475 246 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 RBM3P98179 157 aaKnown RBP-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 COPS9Q8WXC6 57 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms