RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 NTF3P20783 257 aa8.75□□□□□ -1.01
LINC00339-202ENST00000416769 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
LINC00339-202ENST00000416769 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
LINC00339-202ENST00000416769 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 A8MWV9 139 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 M0R381 172 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 RS1O15537 224 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 S100A1P23297 94 aa8.74□□□□□ -1.01
LINC00339-202ENST00000416769 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 SSTP61278 116 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 RIGQ13278 110 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 KCNIP4Q6PIL6 250 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 WFDC10BQ8IUB3 73 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 MSRB1Q9NZV6 116 aa8.73□□□□□ -1.01
LINC00339-202ENST00000416769 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 A0A1B0GW15 77 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 S100PP25815 95 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 TWIST1Q15672 202 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 FRZBQ92765 325 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 JPT2Q9H910 190 aa8.72□□□□□ -1.01
LINC00339-202ENST00000416769 PAX4O43316 350 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 CRYGDP07320 174 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
LINC00339-202ENST00000416769 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 AP1S3Q96PC3 154 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 SAMD10Q9BYL1 202 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
LINC00339-202ENST00000416769 RHODO00212 210 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 S100A8P05109 93 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 CRYBA4P53673 196 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 SLAQ13239 276 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 FHL2Q14192 279 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 C14orf178Q8N769 122 aaPredicted RBP8.69□□□□□ -1.02
LINC00339-202ENST00000416769 TMEM191AQ9H0A3 160 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 DPH3P1Q9H4G8 78 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 SMCO4Q9NRQ5 59 aa8.69□□□□□ -1.02
LINC00339-202ENST00000416769 A0A087WWL8 130 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 TRGV4A0A0C4DH28 118 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 A0A1B0GXF2 115 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 EREGO14944 169 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 EVI2AP22794 236 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 HBBP68871 147 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
LINC00339-202ENST00000416769 RASL11AQ6T310 242 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
LINC00339-202ENST00000416769 GCSHP23434 173 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 CAMPP49913 170 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 RAB4BP61018 213 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 ELOBQ15370 118 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 HHLA3Q9XRX5 114 aa8.67□□□□□ -1.02
LINC00339-202ENST00000416769 TRBV24-1A0A075B6N3 115 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 LOC100131303A0A0U1RQF7 123 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 K7EQD1 137 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
LINC00339-202ENST00000416769 COX19Q49B96 90 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
LINC00339-202ENST00000416769 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
LINC00339-202ENST00000416769 YPEL4Q96NS1 127 aa8.65□□□□□ -1.02
LINC00339-202ENST00000416769 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 F5H697 171 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 RAB4AP20338 218 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 ZNF56Q15929 161 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 MRPL23Q16540 153 aaKnown RBP8.64□□□□□ -1.03
LINC00339-202ENST00000416769 FAM104BQ5XKR9 115 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 Q6ZSN1 163 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 RNF185Q96GF1 192 aa8.64□□□□□ -1.03
LINC00339-202ENST00000416769 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
LINC00339-202ENST00000416769 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 MGPP08493 103 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 GYPEP15421 78 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
LINC00339-202ENST00000416769 WFDC2Q14508 124 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
LINC00339-202ENST00000416769 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 CBLN2Q8IUK8 224 aa8.63□□□□□ -1.03
LINC00339-202ENST00000416769 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms