RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 KIAA1549LQ6ZVL6 1849 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 TET2Q6N021 2002 aaPredicted RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 DEFB108AA8MXU0 73 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 UBE2AP49459 152 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 CMC4P56277 68 aaPredicted RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 ATP11AUNQ6ZP68 121 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 FAM168AQ92567 244 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 TRGV9Q99603 122 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 MGST2Q99735 147 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 CSAG2Q9Y5P2 127 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 RELNP78509 3460 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 WDR87Q6ZQQ6 2873 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 KRTAP16-1A8MUX0 517 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 C10orf142B7Z368 130 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 S100A4P26447 101 aaKnown RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 FAM27BQ5VT28 67 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 ZNF497Q6ZNH5 498 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 C9orf106Q8NAJ2 232 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 B9D2Q9BPU9 175 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 PTPRSQ13332 1948 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3OR15-7A0A075B7D8 119 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3-43A0A0B4J1X8 118 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 CYCSP99999 105 aaKnown RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 PDPNQ86YL7 162 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 SMG1Q96Q15 3661 aaKnown RBP3□□□□□ -1.93
HERC4-204ENST00000395198 POLQO75417 2590 aa3□□□□□ -1.93
HERC4-204ENST00000395198 IGLV5-45A0A087WSX0 123 aa3□□□□□ -1.93
HERC4-204ENST00000395198 RPL37AP8A6NKH3 93 aa3□□□□□ -1.93
HERC4-204ENST00000395198 CRYM-AS1A6NIL9 109 aa3□□□□□ -1.93
HERC4-204ENST00000395198 C16orf90A8MZG2 172 aa3□□□□□ -1.93
HERC4-204ENST00000395198 BMPR1BO00238 502 aa3□□□□□ -1.93
HERC4-204ENST00000395198 PRB1P04280 392 aa3□□□□□ -1.93
HERC4-204ENST00000395198 SYCNQ0VAF6 134 aa3□□□□□ -1.93
HERC4-204ENST00000395198 KRTAP3-3Q9BYR6 98 aa3□□□□□ -1.93
HERC4-204ENST00000395198 KRTAP3-2Q9BYR7 98 aa3□□□□□ -1.93
HERC4-204ENST00000395198 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
HERC4-204ENST00000395198 PRB4P10163 310 aaPredicted RBP3□□□□□ -1.93
HERC4-204ENST00000395198 HMGA2P52926 109 aa3□□□□□ -1.93
HERC4-204ENST00000395198 ZNF714Q96N38 554 aa3□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3OR16-10A0A075B7F0 116 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 ERHP84090 104 aaKnown RBP2.99□□□□□ -1.93
HERC4-204ENST00000395198 ZNF826PQ6ZT77 177 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 GABARAPL1Q9H0R8 117 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 MED13Q9UHV7 2174 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 NBPF19A0A087WUL8 3843 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 GNRH2O43555 120 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 PI3P19957 117 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 NANOS2P60321 138 aaKnown RBP2.99□□□□□ -1.93
HERC4-204ENST00000395198 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
HERC4-204ENST00000395198 COL6A3P12111 3177 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 MUC3AQ02505 3323 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 MALRD1Q5VYJ5 2156 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 C3orf84H3BNL1 204 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 PEX7O00628 323 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 DEFB121Q5J5C9 76 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 C12orf73Q69YU5 71 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 FAM19A2Q8N3H0 131 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 SMIM4Q8WVI0 70 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 CFAP54Q96N23 3096 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 TMSB15BA0A087X1C1 80 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 IFI6P09912 130 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 UBE2D3P61077 147 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 UBE2D2P62837 147 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 SMCR5Q8TEV8 140 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 SLC25A2Q9BXI2 301 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 LINC00574Q9H8X3 128 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 OSTCQ9NRP0 149 aa2.99□□□□□ -1.93
HERC4-204ENST00000395198 IGLV1-51P01701 117 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 C6orf201Q7Z4U5 140 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 FGF23Q9GZV9 251 aaPredicted RBP2.98□□□□□ -1.93
HERC4-204ENST00000395198 ABCA12Q86UK0 2595 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 TRBV7-1A0A0A6YYK4 115 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 Q0VFX4 171 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 LY6EQ16553 131 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 GDF5OSQ5U4N7 250 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 ZNF575Q86XF7 245 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 TIMM8BQ9Y5J9 83 aaPredicted RBP2.98□□□□□ -1.93
HERC4-204ENST00000395198 USP9YO00507 2555 aaPredicted RBP2.98□□□□□ -1.93
HERC4-204ENST00000395198 FREM3P0C091 2139 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 LY6G6EA0A0G2JKS1 128 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 ATP5EP56381 51 aaPredicted RBP2.98□□□□□ -1.93
HERC4-204ENST00000395198 ARHGAP5-AS1Q96IT6 56 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 NHP2Q9NX24 153 aaKnown RBP2.98□□□□□ -1.93
HERC4-204ENST00000395198 U3KQA8 63 aa2.98□□□□□ -1.93
HERC4-204ENST00000395198 USP9XQ93008 2570 aaPredicted RBP2.97□□□□□ -1.93
HERC4-204ENST00000395198 SETD2Q9BYW2 2564 aaPredicted RBP2.97□□□□□ -1.93
HERC4-204ENST00000395198 IGKV3-7A0A075B6H7 116 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 GCHFRP30047 84 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 XCL1P47992 114 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 SPANXN5Q5MJ07 72 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 ARFGEF3Q5TH69 2177 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3-72A0A0B4J1Y9 119 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 TCRBV4S1A1TA0A5B7 111 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 E7EUB6 86 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 DSCR9P59020 149 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 C15orf32Q32M92 178 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 FAM216BQ8N7L0 139 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms