RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PLAC8Q9NZF1 115 aa0.73□□□□□ -2.29
RPL39-201ENST00000361575 CACNA1EQ15878 2313 aa0.73□□□□□ -2.29
RPL39-201ENST00000361575 EFCAB10A6NFE3 127 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 IFNA17P01571 189 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 EDDM3BP56851 147 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 FAM74A4Q5TZK3 123 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.72□□□□□ -2.29
RPL39-201ENST00000361575 C1orf54Q8WWF1 131 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 SERP1Q9Y6X1 66 aa0.72□□□□□ -2.29
RPL39-201ENST00000361575 DOCK1Q14185 1865 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 A0A1B0GV90 55 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 SPAARA0A1B0GVQ0 90 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 APODP05090 189 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 CCL8P80075 99 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 RPL13AP3Q6NVV1 102 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 Q8N8P6 123 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 IFT140Q96RY7 1462 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 PATJQ8NI35 1801 aa0.71□□□□□ -2.3
RPL39-201ENST00000361575 CADP27708 2225 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 ROCK2O75116 1388 aaKnown RBP0.7□□□□□ -2.3
RPL39-201ENST00000361575 CDK13Q14004 1512 aaKnown RBP0.7□□□□□ -2.3
RPL39-201ENST00000361575 NWD2Q9ULI1 1742 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 BCL9LQ86UU0 1499 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 TRGV1A0A0A0MS02 117 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 TRBV10-3A0A0K0K1G6 114 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 BTG2P78543 158 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 RBM3P98179 157 aaKnown RBP0.7□□□□□ -2.3
RPL39-201ENST00000361575 Q6AWC8 147 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 ZNF818PQ6ZRF7 136 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 SMR3AQ99954 134 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 BPESC1Q9GZL8 116 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 LINC00312Q9Y6C7 94 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 TNCP24821 2201 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 CASKIN1Q8WXD9 1431 aa0.7□□□□□ -2.3
RPL39-201ENST00000361575 KCPQ6ZWJ8 1503 aa0.69□□□□□ -2.3
RPL39-201ENST00000361575 F2Z2F3 143 aa0.69□□□□□ -2.3
RPL39-201ENST00000361575 INSL4Q14641 139 aa0.69□□□□□ -2.3
RPL39-201ENST00000361575 MYH8P13535 1937 aa0.69□□□□□ -2.3
RPL39-201ENST00000361575 HCG22E2RYF7 251 aa0.68□□□□□ -2.3
RPL39-201ENST00000361575 SMIM11BQ8TCY0 68 aa0.68□□□□□ -2.3
RPL39-201ENST00000361575 WFDC6Q9BQY6 131 aa0.68□□□□□ -2.3
RPL39-201ENST00000361575 KDM6BO15054 1643 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 ARAP2Q8WZ64 1704 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 APOC4-APOC2K7ER74 178 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 ACYP2P14621 99 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 COPS9Q8WXC6 57 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 QRICH2Q9H0J4 1663 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 NALCNQ8IZF0 1738 aa0.67□□□□□ -2.3
RPL39-201ENST00000361575 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 ANK2Q01484 3957 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 ZMYM4Q5VZL5 1548 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 DLEU1O43261 78 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 SIX6O95475 246 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 FGF7P21781 194 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 PRR15LQ9BU68 103 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 NAA60Q9H7X0 242 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 POLQO75417 2590 aa0.66□□□□□ -2.3
RPL39-201ENST00000361575 VMO1Q7Z5L0 202 aa0.65□□□□□ -2.31
RPL39-201ENST00000361575 PRDM2Q13029 1718 aa0.64□□□□□ -2.31
RPL39-201ENST00000361575 Q6ZRX8 168 aa0.64□□□□□ -2.31
RPL39-201ENST00000361575 PROK2Q9HC23 129 aa0.64□□□□□ -2.31
RPL39-201ENST00000361575 GOLGA3Q08378 1498 aa0.64□□□□□ -2.31
RPL39-201ENST00000361575 LRRC37A3O60309 1634 aa0.64□□□□□ -2.31
RPL39-201ENST00000361575 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
RPL39-201ENST00000361575 PIEZO1Q92508 2521 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 TRAV13-2A0A0B4J235 113 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 TMEM14DPA8MWL7 114 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 Q56UQ5 140 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 PP6455Q8WZ26 134 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 SCN3BQ9NY72 215 aa0.63□□□□□ -2.31
RPL39-201ENST00000361575 PI4KAP42356 2102 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 NAV2Q8IVL1 2488 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 DOCK2Q92608 1830 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 IFT172Q9UG01 1749 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 C12orf73Q69YU5 71 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 ABCA12Q86UK0 2595 aa0.62□□□□□ -2.31
RPL39-201ENST00000361575 TPRP12270 2363 aaKnown RBP0.61□□□□□ -2.31
RPL39-201ENST00000361575 MIF4GDA9UHW6 222 aaKnown RBP0.61□□□□□ -2.31
RPL39-201ENST00000361575 LINC00587B1AMM8 73 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 G3V318 75 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 AKAIN1P0CW23 69 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 ROBO1Q9Y6N7 1651 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 NAIPQ13075 1403 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 LAMC3Q9Y6N6 1575 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 F8P00451 2351 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
RPL39-201ENST00000361575 TRAV1-2A0A0B4J238 106 aa0.6□□□□□ -2.31
RPL39-201ENST00000361575 NMBP08949 121 aa0.6□□□□□ -2.31
RPL39-201ENST00000361575 CUL7Q14999 1698 aa0.59□□□□□ -2.31
RPL39-201ENST00000361575 CATR1Q13166 79 aa0.59□□□□□ -2.31
RPL39-201ENST00000361575 PXDNQ92626 1479 aa0.59□□□□□ -2.32
RPL39-201ENST00000361575 ASXL3Q9C0F0 2248 aa0.58□□□□□ -2.32
RPL39-201ENST00000361575 CCL18P55774 89 aa0.58□□□□□ -2.32
RPL39-201ENST00000361575 C10orf128Q5T292 105 aa0.58□□□□□ -2.32
RPL39-201ENST00000361575 C2orf88Q9BSF0 95 aa0.58□□□□□ -2.32
RPL39-201ENST00000361575 SCP2D1Q9UJQ7 156 aa0.58□□□□□ -2.32
RPL39-201ENST00000361575 CELSR2Q9HCU4 2923 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms