RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RPL23P62829 140 aaKnown RBP14.9□□□□□ -0.02
SNX3-202ENST00000349379 NFE4Q86UQ8 179 aa14.9□□□□□ -0.02
SNX3-202ENST00000349379 ISOC2Q96AB3 205 aa14.9□□□□□ -0.02
SNX3-202ENST00000349379 IBA57-AS1B1ANH7 110 aa14.89□□□□□ -0.03
SNX3-202ENST00000349379 MGPP08493 103 aa14.89□□□□□ -0.03
SNX3-202ENST00000349379 SUMO4Q6EEV6 95 aa14.89□□□□□ -0.03
SNX3-202ENST00000349379 NAT8Q9UHE5 227 aa14.89□□□□□ -0.03
SNX3-202ENST00000349379 TWIST1Q15672 202 aa14.88□□□□□ -0.03
SNX3-202ENST00000349379 TSKUQ8WUA8 353 aa14.88□□□□□ -0.03
SNX3-202ENST00000349379 GFRA4Q9GZZ7 299 aa14.88□□□□□ -0.03
SNX3-202ENST00000349379 V9GYV3 84 aa14.88□□□□□ -0.03
SNX3-202ENST00000349379 FAM231BA6NCW3 169 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 H7C1H1 209 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 IGHV3-30P01768 117 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 IGHV3-33P01772 117 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 IGHV3-30-3P0DP02 117 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 IGHV3-30-5P0DP03 117 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 Q8N3U1 123 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 DNAJC30Q96LL9 226 aa14.87□□□□□ -0.03
SNX3-202ENST00000349379 NIT1Q86X76 327 aa14.86□□□□□ -0.03
SNX3-202ENST00000349379 PGLYRP4Q96LB8 373 aa14.86□□□□□ -0.03
SNX3-202ENST00000349379 LAGE3Q14657 143 aa14.85□□□□□ -0.03
SNX3-202ENST00000349379 DAZ4Q86SG3 579 aaKnown RBP14.85□□□□□ -0.03
SNX3-202ENST00000349379 C15orf54Q8N8G6 183 aa14.85□□□□□ -0.03
SNX3-202ENST00000349379 DAZ3Q9NR90 486 aaKnown RBP14.85□□□□□ -0.03
SNX3-202ENST00000349379 TRBV6-8A0A0A6YYG3 113 aa14.84□□□□□ -0.03
SNX3-202ENST00000349379 HIGD1CA8MV81 97 aa14.84□□□□□ -0.03
SNX3-202ENST00000349379 RAB14P61106 215 aa14.84□□□□□ -0.03
SNX3-202ENST00000349379 ADIRFQ15847 76 aa14.84□□□□□ -0.03
SNX3-202ENST00000349379 RASL11AQ6T310 242 aa14.84□□□□□ -0.03
SNX3-202ENST00000349379 IFITM2Q01629 132 aa14.83□□□□□ -0.04
SNX3-202ENST00000349379 CLLU1Q5K131 121 aa14.83□□□□□ -0.04
SNX3-202ENST00000349379 TMEM97Q5BJF2 176 aa14.82□□□□□ -0.04
SNX3-202ENST00000349379 NTM-AS1Q6ZSK4 140 aa14.82□□□□□ -0.04
SNX3-202ENST00000349379 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.82□□□□□ -0.04
SNX3-202ENST00000349379 CHCHD7Q9BUK0 85 aa14.82□□□□□ -0.04
SNX3-202ENST00000349379 PCLOQ9Y6V0 5065 aa14.81□□□□□ -0.04
SNX3-202ENST00000349379 A0A1B0GUT8 65 aa14.81□□□□□ -0.04
SNX3-202ENST00000349379 FRZBQ92765 325 aa14.81□□□□□ -0.04
SNX3-202ENST00000349379 NIT2Q9NQR4 276 aa14.81□□□□□ -0.04
SNX3-202ENST00000349379 SMIM15Q7Z3B0 74 aa14.8□□□□□ -0.04
SNX3-202ENST00000349379 GATD1Q8NB37 220 aa14.8□□□□□ -0.04
SNX3-202ENST00000349379 NUP35Q8NFH5 326 aa14.79□□□□□ -0.04
SNX3-202ENST00000349379 BORCS7Q96B45 105 aa14.79□□□□□ -0.04
SNX3-202ENST00000349379 SPATA12Q7Z6I5 190 aa14.78□□□□□ -0.04
SNX3-202ENST00000349379 URGCP-MRPS24S4R325 110 aa14.78□□□□□ -0.04
SNX3-202ENST00000349379 DNAH5Q8TE73 4624 aa14.78□□□□□ -0.04
SNX3-202ENST00000349379 A0A087WTM6 91 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 SMIM27A0A1W2PRY6 76 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 KRTAP10-2P60368 255 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 IQCJQ1A5X6 159 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 TMEM191AQ9H0A3 160 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 Q9HAA7 133 aa14.77□□□□□ -0.05
SNX3-202ENST00000349379 TRAV26-2A0A0B4J265 109 aa14.76□□□□□ -0.05
SNX3-202ENST00000349379 NAT8BQ9UHF3 227 aa14.76□□□□□ -0.05
SNX3-202ENST00000349379 A0A087WX48 190 aa14.75□□□□□ -0.05
SNX3-202ENST00000349379 TRAV8-3A0A0A6YYJ7 113 aa14.75□□□□□ -0.05
SNX3-202ENST00000349379 LRP1BQ9NZR2 4599 aa14.75□□□□□ -0.05
SNX3-202ENST00000349379 TRBV25-1A0A075B6N4 114 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 PKIAP61925 76 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 RIGQ13278 110 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 MPV17L2Q567V2 206 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 KCNIP4Q6PIL6 250 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 RPL39LQ96EH5 51 aaKnown RBP14.74□□□□□ -0.05
SNX3-202ENST00000349379 RNF185Q96GF1 192 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 KLK12Q9UKR0 248 aa14.74□□□□□ -0.05
SNX3-202ENST00000349379 IGHV1-24A0A0C4DH33 117 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 LRCOL1A6NCL2 159 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 C16orf90A8MZG2 172 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 ELOBQ15370 118 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 CHCHD5Q9BSY4 110 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 KIAA1109Q2LD37 5005 aa14.73□□□□□ -0.05
SNX3-202ENST00000349379 HERC2O95714 4834 aa14.72□□□□□ -0.05
SNX3-202ENST00000349379 EREGO14944 169 aa14.72□□□□□ -0.05
SNX3-202ENST00000349379 TM2D2Q9BX73 214 aa14.72□□□□□ -0.05
SNX3-202ENST00000349379 TRBV6-5A0A0K0K1A5 114 aa14.71□□□□□ -0.05
SNX3-202ENST00000349379 TMEM262E9PQX1 116 aa14.71□□□□□ -0.05
SNX3-202ENST00000349379 PSCAO43653 123 aa14.71□□□□□ -0.05
SNX3-202ENST00000349379 RAB4AP20338 218 aa14.71□□□□□ -0.05
SNX3-202ENST00000349379 ATRAIDQ6UW56 229 aa14.71□□□□□ -0.05
SNX3-202ENST00000349379 RYR1P21817 5038 aa14.7□□□□□ -0.06
SNX3-202ENST00000349379 GAS8-AS1O95177 125 aa14.7□□□□□ -0.06
SNX3-202ENST00000349379 PNRC1Q12796 327 aaPredicted RBP14.7□□□□□ -0.06
SNX3-202ENST00000349379 AMN1Q8IY45 258 aa14.7□□□□□ -0.06
SNX3-202ENST00000349379 RBX1P62877 108 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 GAGE6Q13070 117 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 COTL1Q14019 142 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 CDPF1Q6NVV7 123 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 UQCC3Q6UW78 93 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 Q8N976 141 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 UBE2WQ96B02 151 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 MRAP2Q96G30 205 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 TMEM243Q9BU79 118 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 PGPEP1Q9NXJ5 209 aa14.68□□□□□ -0.06
SNX3-202ENST00000349379 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
SNX3-202ENST00000349379 Q0VG73 95 aa14.67□□□□□ -0.06
SNX3-202ENST00000349379 ENHOQ6UWT2 76 aa14.67□□□□□ -0.06
SNX3-202ENST00000349379 MAPKAPK5-AS1Q8N8E1 139 aa14.67□□□□□ -0.06
SNX3-202ENST00000349379 RMI2Q96E14 147 aa14.67□□□□□ -0.06
SNX3-202ENST00000349379 COX11Q9Y6N1 276 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms