RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NDPQ00604 133 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 PRR31Q5SQ13 230 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 IGKV2D-26A0A0A0MRZ7 120 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 LINC01620Q4KN68 170 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 WFDC12Q8WWY7 111 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 CHCHD5Q9BSY4 110 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 IMUPQ9GZP8 106 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 MSRB1Q9NZV6 116 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 U3KQE9 123 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 IGLV2-18A0A075B6J9 118 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 IGHV7-4-1A0A0J9YVY3 117 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 CLPSL1A2RUU4 121 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 H7C2G1 150 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 DNAL4O96015 105 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 GHRHP01286 108 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 SFTA2Q6UW10 78 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 ZFAND3Q9H8U3 227 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 SMAD5-AS1Q9Y6J3 95 aa3.15□□□□□ -1.9
UBE4A-201ENST00000252108 FLNCQ14315 2725 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 IGSF10Q6WRI0 2623 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 FAM240AA0A1B0GVK7 77 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 TIMM17BO60830 172 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 NFE4Q86UQ8 179 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 A0A096LNT2 108 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-35A0A0C4DH35 117 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-66A0A0C4DH42 116 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 TRBV30A0A0K0K1B3 111 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 GATA3P23771 443 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 UBE2D3P61077 147 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 UBE2D2P62837 147 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 C9orf66Q5T8R8 295 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 SHISA2Q6UWI4 295 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 FAM19A4Q96LR4 140 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 RHPN1-AS1Q9BWJ2 59 aa3.15□□□□□ -1.91
UBE4A-201ENST00000252108 PTPRQQ9UMZ3 2332 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 A0A0J9YY99 117 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 PIK3CD-AS1Q5SR53 167 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 SPXQ9BT56 116 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 C1orf43Q9BWL3 253 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 DEFB130BP0DP73 79 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 DEFB130AP0DP74 79 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
UBE4A-201ENST00000252108 SAA4P35542 130 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 HERV-K104P63124 156 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 POLEQ07864 2286 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 LYNX1G3V0Z9 82 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 LGALS9O00182 355 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 LYNX1P0DP58 116 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 UBE2D4Q9Y2X8 147 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 PYGO1Q9Y3Y4 419 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 PDZD2O15018 2839 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 TRAV26-1A0A087WT03 109 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 RBMY1BA6NDE4 496 aaKnown RBP3.14□□□□□ -1.91
UBE4A-201ENST00000252108 RBMY1EA6NEQ0 496 aaKnown RBP3.14□□□□□ -1.91
UBE4A-201ENST00000252108 F6UB75 175 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 RBMY1DP0C7P1 496 aaKnown RBP3.14□□□□□ -1.91
UBE4A-201ENST00000252108 RBMY1A1P0DJD3 496 aaKnown RBP3.14□□□□□ -1.91
UBE4A-201ENST00000252108 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 ZNF876PQ49A33 203 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 IGFL4Q6B9Z1 124 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 APRG1Q8IVJ8 170 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 MAPKAPK5-AS1Q8N8E1 139 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 CMYA5Q8N3K9 4069 aa3.14□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3OR16-13A0A075B7E8 117 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-74A0A0B4J1X5 117 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 TRBV27A0A0K0K1C4 114 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 NXPH4O95158 308 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-49A0A0A0MS15 119 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 HERVK_113P63121 156 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 SUMO4Q6EEV6 95 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 POM121L12Q8N7R1 296 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 NTN5Q8WTR8 489 aaPredicted RBP3.13□□□□□ -1.91
UBE4A-201ENST00000252108 ZNF580Q9UK33 172 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 TCL1BO95988 128 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 C11orf68Q9H3H3 251 aaKnown RBP3.13□□□□□ -1.91
UBE4A-201ENST00000252108 ZNF561-AS1K7EIQ3 104 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 CFHR3Q02985 330 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 SBSPONQ8IVN8 264 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 C5orf56Q8N8D9 126 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 TRAV13-2A0A0B4J235 113 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 SOCS3O14543 225 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-30P01768 117 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-30-5P0DP03 117 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 C20orf203Q8NBC4 194 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 ICOSQ9Y6W8 199 aa3.13□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3OR16-8A0A075B7F1 116 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 COL12A1Q99715 3063 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 TMEM223A0PJW6 202 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 POLR2KP53803 58 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms