RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ercc8Q8CFD5 397 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm4133K9J7G6 307 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 F7P70375 446 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Srp19Q9D7A6 144 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Phlda3Q9WV95 125 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm45213A0A0U1RNZ6 101 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vamp8O70404 101 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 ElnP54320 860 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tmem167bQ80X45 74 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tctn3Q8R2Q6 595 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Reg4Q9D8G5 157 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Zfpl1Q9DB43 310 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Klk1b27Q9JM71 263 aa7.83□□□□□ -1.16
Scn8a-213ENSMUST00000201549 H2-M5A7VMS3 348 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Igkv4-90A0A075B5L3 117 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Mpig6bD7PDD4 242 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ca2P00920 260 aaKnown RBP7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 NmbQ9CR53 121 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam213bQ9DB60 201 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 H3BKT1 185 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm21310J3QQ23 232 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ifitm5O88728 134 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Prdx2Q61171 198 aaKnown RBP7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Slc25a47Q6IS41 310 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ndufb3Q9CQZ6 104 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rp1l1Q8CGM2 1859 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trbv3A0A0A6YYE2 117 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rer1Q9CQU3 196 aaKnown RBP7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rnf7Q9WTZ1 113 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 FancmQ8BGE5 2021 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Frrs1lB1AXV0 293 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm20604F8WIA3 75 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 P06323 132 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Nutf2P61971 127 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 SrstQ06666 185 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr94Q6UAH0 386 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Poc1aQ8JZX3 405 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Mpv17lQ99MS3 194 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 PtprsB0V2N1 1907 aa7.82□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm28038F7BCN9 126 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vmn1r78K7N608 313 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Hoxa3P02831 443 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm867A0A1W2P7T4 151 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr975Q8VG91 310 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Insig2Q91WG1 225 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ifitm2Q99J93 144 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trav8-1A0A075B641 109 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Dcaf10A2AKB9 566 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm44501A8R0T9 150 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tm2d3Q8BJ83 261 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Atp5lQ9CPQ8 103 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm4881A0A140LIR9 352 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm6594J3QM43 95 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 SelenotP62342 195 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr904Q7TRC9 310 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Prr3Q811B5 190 aaKnown RBP7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Lgals4Q8K419 326 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cacng8Q8VHW2 423 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Slamf6Q9ET39 351 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm2174F6ZVF2 133 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 GhrhP16043 103 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Eda2rQ8BX35 297 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Bhlha15Q9QYC3 197 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Greb1Q3UHK3 1954 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 MyofQ69ZN7 2048 aaKnown RBP7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 GlulP15105 373 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Hint1P70349 126 aaKnown RBP7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Prss46Q5M8S2 314 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Bricd5Q8BV89 174 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr279Q8VFD8 310 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tmem219Q9D123 240 aa7.81□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Igkv4-57-1A0A075B5M4 119 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Lynx1P0DP60 116 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 OpalinQ7M750 143 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rnase2aQ8K196 155 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Prr30Q9D9B7 401 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trip12G5E870 2025 aaKnown RBP7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Wipf3P0C7L0 485 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 CirbpP60824 172 aaKnown RBP7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cd33Q63994 403 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Dennd4cA6H8H2 1906 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Pilrb2Q2YFS1 225 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam24aQ8CF27 98 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Smim8Q9CQQ0 97 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ighv5-4A0A075B5P9 117 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Igkv4-81A0A0G2JEY5 119 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gimap1P70224 277 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 GalnsQ571E4 520 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vmn1r235Q8R297 328 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr958Q8VEY3 312 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Carhsp1Q9CR86 148 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam241aQ9CZL2 131 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 9330161L09RikQ9D253 136 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ccl28Q9JIL2 130 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rnd2Q9QYM5 227 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 NdpP48744 131 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Sp9Q64HY3 484 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rbfox3Q8BIF2 374 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cd200r5Q8BTP3 270 aa7.8□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr1323Q8VF35 309 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms