RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Vmn1r54Q9EPB8 315 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm14412A2ARR7 526 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ptbp1P17225 527 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Dynlt3P56387 116 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 COA4Q8BT51 87 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 AY761184Q9D848 116 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Kcnip2Q9JJ69 270 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Arpc1aQ9R0Q6 370 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Pdzd2E9Q1M1 2796 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ino80eA0A0U1RP99 260 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Zfp950A0A0U1RQ46 609 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Sult2a1P52843 285 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Klhl8P59280 629 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr917Q7TRC3 309 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ifna14Q810G3 189 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 SvbpQ99LQ4 66 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Nkg7Q99PA5 165 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Q9CX63 252 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Mlst8Q9DCJ1 326 aa16.78■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Trav17A0A075B655 113 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm37388A0A0A6YY46 143 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Cyb561d1A2AE42 229 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Bmp5P49003 452 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 SeleQ00690 612 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Zfp970Q08BU3 522 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1394Q8VET2 312 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 RTRAFQ9CQE8 244 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Tmem170aQ9D342 144 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Try5Q9QUK9 246 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Try4Q9R0T7 246 aa16.77■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ighv3-1A0A075B5S6 116 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Pglyrp3A1A547 347 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Lynx1P0DP60 116 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 HexbP20060 536 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Id3P41133 119 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Pitpnc1Q8K4R4 332 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Vmn1r225Q8R2A5 298 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Chrdl1Q920C1 447 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Hsbp1Q9CQZ1 76 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 1700029F12RikQ9CRB4 147 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Fbxl17Q9QZN1 701 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm28171A0A087WQ19 227 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Ighv1-69A0A0G2JFS5 117 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm12355A2A4X6 163 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm15557A6PWY0 234 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr196E9PYP4 309 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 P01790 122 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gsx1P31315 261 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Wnt10aP70701 417 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Srsf3P84104 164 aaKnown RBP16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Trav8d-1Q5R1H8 112 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Cd52Q64389 74 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Sox21Q811W0 276 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Q8BG31 207 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Aadacl4Q8BM81 407 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 9030612E09RikQ8CE20 140 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Q9CQT9 129 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 VsirQ9D659 308 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Pf4Q9Z126 105 aa16.76■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 1700067P10RikG3X8U2 183 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 AipO08915 330 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 NdpP48744 131 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 F13bQ07968 669 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr1258Q8VGN6 311 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Tmem70Q921N7 253 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Chac2Q9CQG1 178 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Ms4a4cQ9D3F6 226 aa16.75■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm6993A0A1W2P738 69 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm15130F6PYN5 206 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 P01788 123 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Rom1P32958 351 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr965Q7TRA7 312 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Phf13Q8K2W6 296 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr958Q8VEY3 312 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gng10Q9CXP8 68 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Spata25Q9DA57 226 aa16.74■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm10638F6QEG2 257 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 A630076J17RikJ3QQ32 107 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Cd300lbQ3U497 209 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 LgalslbQ7TPX9 165 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 RpeQ8VEE0 228 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Atp6v0e1Q9CQD8 81 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Nicn1Q9CQM0 213 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Tmem52Q9D702 196 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Ctxnd1A0A1B0GST9 59 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Mob4Q6PEB6 225 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Rnase2aQ8K196 155 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Ms4a6dQ99N07 247 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Map1lc3bQ9CQV6 125 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Tmem190Q9D2E9 166 aa16.73■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr913E9Q716 312 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 P01643 108 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Spint3Q3UW09 88 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Eif5a2Q8BGY2 153 aaKnown RBP16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Olfr1294Q8VGE5 312 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Dok5Q91ZM9 306 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Tenm4Q3UHK6 2771 aa16.72■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Mmp27D3YV89 551 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Gm20767O70517 169 aa16.71■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms