RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SMCO4Q9NRQ5 59 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 GNRH2O43555 120 aa9.28□□□□□ -0.92
RPAIN-216ENST00000575599 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
RPAIN-216ENST00000575599 TYMSP04818 313 aa9.28□□□□□ -0.92
RPAIN-216ENST00000575599 IGKV3D-20A0A0C4DH25 116 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 A0A1W2PPQ1 181 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 GZMBP10144 247 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 TDRG1Q3Y452 100 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 IMMP2LQ96T52 175 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 NAT8BQ9UHF3 227 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 DNAH6Q9C0G6 4158 aa9.27□□□□□ -0.93
RPAIN-216ENST00000575599 IGHV3-16A0A0C4DH30 117 aa9.26□□□□□ -0.93
RPAIN-216ENST00000575599 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
RPAIN-216ENST00000575599 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
RPAIN-216ENST00000575599 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
RPAIN-216ENST00000575599 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
RPAIN-216ENST00000575599 SMIM27A0A1W2PRY6 76 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 HIGD1CA8MV81 97 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 SCO1O75880 301 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 CXCL1P09341 107 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-216ENST00000575599 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 SPXQ9BT56 116 aa9.25□□□□□ -0.93
RPAIN-216ENST00000575599 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
RPAIN-216ENST00000575599 IGLV2-18A0A075B6J9 118 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 F2Z2F3 143 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 M0R2N4 97 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 CBLN2Q8IUK8 224 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 PHLDA3Q9Y5J5 127 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 H3BVH4 76 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 M0R2P5 195 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 GHRHP01286 108 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 ARMS2P0C7Q2 107 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 CCL18P55774 89 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 SSTP61278 116 aa9.24□□□□□ -0.93
RPAIN-216ENST00000575599 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 MUC4Q99102 2169 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 TRAV9-1A0A075B6T8 112 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 FOXA3P55318 350 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-216ENST00000575599 RIGQ13278 110 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 LYZL1Q6UWQ5 148 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 SYT8Q8NBV8 401 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 RASL10AQ92737 203 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
RPAIN-216ENST00000575599 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 A0A1B0GUT8 65 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 H3BNG1 76 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 PAX4O43316 350 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 CACNG7P62955 275 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 DNLZQ5SXM8 178 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
RPAIN-216ENST00000575599 MUC21A0A0G2JKD1 596 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 MUC21A0A140T8X8 626 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 S100A8P05109 93 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 OR5AL1P0C617 328 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 FHL2Q14192 279 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 ELOBQ15370 118 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 TWIST1Q15672 202 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
RPAIN-216ENST00000575599 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 ZFP82Q8N141 532 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 PRO0255Q9UI72 69 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 HHLA3Q9XRX5 114 aa9.21□□□□□ -0.94
RPAIN-216ENST00000575599 A0A096LPF7 62 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 TRAV4A0A0B4J268 109 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 A0A1B0GW15 77 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 M0R381 172 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 SNAI2O43623 268 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 RNASE3P12724 160 aaKnown RBP9.2□□□□□ -0.94
RPAIN-216ENST00000575599 CTRLP40313 264 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 CRYBA4P53673 196 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 WDR73Q6P4I2 378 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 ATP5L2Q7Z4Y8 100 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
RPAIN-216ENST00000575599 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 TGIF2-C20orf24A0A0A6YYL0 155 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 CAMPP49913 170 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 RAB4BP61018 213 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 SLAQ13239 276 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-216ENST00000575599 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-216ENST00000575599 ICOSQ9Y6W8 199 aa9.19□□□□□ -0.94
RPAIN-216ENST00000575599 DNAH10Q8IVF4 4471 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 NTF3P20783 257 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 HBBP68871 147 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 799.7 ms