RNA–Protein interactions for RNA: ENST00000560759.5

ZHX3-220, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 5

Gene ZHX3, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-220ENST00000560759 TRAV12-3A0A0B4J271 114 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 A0A1B0GW64 132 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 G3V318 75 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 J3KT08 172 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 J3QLW9 94 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 TNFP01375 233 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 SLC25A5P05141 298 aaKnown RBP-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 HLA-DRB4P13762 266 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CRYBA4P53673 196 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 RPS28P62857 69 aaKnown RBP-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CFAP126Q5VTH2 177 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 SCIMPQ6UWF3 145 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 TMEM91Q6ZNR0 172 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 STX12Q86Y82 276 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 THEM6Q8WUY1 208 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CHMP6Q96FZ7 201 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 SAR1AQ9NR31 198 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 RPRMQ9NS64 109 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CALML5Q9NZT1 146 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 MED31Q9Y3C7 131 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 R4GMQ9 66 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 HLA-DRB4X5D2U9 266 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CNOT1A5YKK6 2376 aaKnown RBP-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 HYDINQ4G0P3 5121 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 MED23Q9ULK4 1368 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CHD8Q9HCK8 2581 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 BCL9LQ86UU0 1499 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 CTTNBP2Q8WZ74 1663 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 DOCK5Q9H7D0 1870 aa-0.37□□□□□ -2.47
ZHX3-220ENST00000560759 ABCA1O95477 2261 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 C2CD3Q4AC94 2353 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 HERC1Q15751 4861 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 M0QZK8 103 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 BCE1O60756 84 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 DPM2O94777 84 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 PIRTP0C851 137 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SPRR1BP22528 89 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 POLR2HP52434 150 aaKnown RBP-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 NPC2P61916 151 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 COX17Q14061 63 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TMEM78Q5T7P6 136 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SPANXN1Q5VSR9 72 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TRIQKQ629K1 86 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SPAG11AQ6PDA7 123 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TOMM20LQ6UXN7 152 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 ZNF818PQ6ZRF7 136 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SNX29P2Q8IUI4 249 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SMIM20Q8N5G0 67 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TMEM35BQ8NCS4 154 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 CCDC115Q96NT0 180 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SPANXA1Q9NS26 97 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 IBTKQ9P2D0 1353 aaPredicted RBP-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TCOF1Q13428 1488 aaKnown RBP-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 LPAP08519 4548 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 SSC5DA1L4H1 1573 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 PIEZO2Q9H5I5 2752 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 COL6A3P12111 3177 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 DCHS2Q6V1P9 2916 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 PKD1L1Q8TDX9 2849 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 FLNBO75369 2602 aaKnown RBP-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 FAM135BQ49AJ0 1406 aa-0.38□□□□□ -2.47
ZHX3-220ENST00000560759 TENM2Q9NT68 2774 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 DOCK4Q8N1I0 1966 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 KIAA1109Q2LD37 5005 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 WDR7Q9Y4E6 1490 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 ROCK1Q13464 1354 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 EIF3AQ14152 1382 aaKnown RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PIGBOS1A0A0B4J2F0 54 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 A0A1W2PRE2 83 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 TCRAP04437 139 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PAEPP09466 180 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PIPP12273 146 aaPredicted RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 HAMPP81172 84 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 C9orf116Q5BN46 136 aaPredicted RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 HRCT1Q6UXD1 115 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 CTAGE3PQ8IX95 158 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 OR8I2Q8N0Y5 310 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 MMGT1Q8N4V1 131 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 SKA2Q8WVK7 121 aaPredicted RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 SDF2Q99470 211 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 AGPAT4-IT1Q9H0P7 198 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 LINC00472Q9H8W2 130 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 TRAPPC2LQ9UL33 140 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 DNAJC15Q9Y5T4 150 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PTPRDP23468 1912 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 MYLKQ15746 1914 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 NUP98P52948 1817 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 SPTBN1Q01082 2364 aaKnown RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 URB1O60287 2271 aaKnown RBP-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 NF1P21359 2839 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PLXNA4Q9HCM2 1894 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 CHD9Q3L8U1 2897 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 CSPG4Q6UVK1 2322 aa-0.39□□□□□ -2.47
ZHX3-220ENST00000560759 PIK3C2AO00443 1686 aa-0.4□□□□□ -2.47
ZHX3-220ENST00000560759 PPRC1Q5VV67 1664 aaKnown RBP-0.4□□□□□ -2.47
ZHX3-220ENST00000560759 PLXND1Q9Y4D7 1925 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms