RNA–Protein interactions for RNA: ENST00000560759.5

ZHX3-220, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 5

Gene ZHX3, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-220ENST00000560759 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
ZHX3-220ENST00000560759 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
ZHX3-220ENST00000560759 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
ZHX3-220ENST00000560759 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
ZHX3-220ENST00000560759 FOXD1Q16676 465 aa14.36□□□□□ -0.11
ZHX3-220ENST00000560759 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
ZHX3-220ENST00000560759 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
ZHX3-220ENST00000560759 MSH5O43196 834 aa13.64□□□□□ -0.23
ZHX3-220ENST00000560759 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
ZHX3-220ENST00000560759 ADRA2BP18089 450 aa13.43□□□□□ -0.26
ZHX3-220ENST00000560759 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
ZHX3-220ENST00000560759 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
ZHX3-220ENST00000560759 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
ZHX3-220ENST00000560759 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
ZHX3-220ENST00000560759 DMRT2Q9Y5R5 561 aa12.21□□□□□ -0.45
ZHX3-220ENST00000560759 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
ZHX3-220ENST00000560759 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
ZHX3-220ENST00000560759 HOXD11P31277 338 aaPredicted RBP11.88□□□□□ -0.51
ZHX3-220ENST00000560759 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
ZHX3-220ENST00000560759 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
ZHX3-220ENST00000560759 NPM3O75607 178 aaKnown RBP11.66□□□□□ -0.54
ZHX3-220ENST00000560759 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
ZHX3-220ENST00000560759 KCNA4P22459 653 aa11.61□□□□□ -0.55
ZHX3-220ENST00000560759 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
ZHX3-220ENST00000560759 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
ZHX3-220ENST00000560759 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
ZHX3-220ENST00000560759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.62
ZHX3-220ENST00000560759 POTEHQ6S545 545 aa11.12□□□□□ -0.63
ZHX3-220ENST00000560759 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
ZHX3-220ENST00000560759 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
ZHX3-220ENST00000560759 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
ZHX3-220ENST00000560759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
ZHX3-220ENST00000560759 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
ZHX3-220ENST00000560759 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
ZHX3-220ENST00000560759 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
ZHX3-220ENST00000560759 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
ZHX3-220ENST00000560759 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
ZHX3-220ENST00000560759 APLP2Q06481 763 aa10.74□□□□□ -0.69
ZHX3-220ENST00000560759 CAPN15O75808 1086 aa10.71□□□□□ -0.69
ZHX3-220ENST00000560759 ZBTB22O15209 634 aa10.7□□□□□ -0.7
ZHX3-220ENST00000560759 DSG3P32926 999 aa10.69□□□□□ -0.7
ZHX3-220ENST00000560759 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
ZHX3-220ENST00000560759 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
ZHX3-220ENST00000560759 ATF5Q9Y2D1 282 aaPredicted RBP10.5□□□□□ -0.73
ZHX3-220ENST00000560759 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
ZHX3-220ENST00000560759 ABCB7O75027 752 aa10.47□□□□□ -0.73
ZHX3-220ENST00000560759 POLA2Q14181 598 aa10.42□□□□□ -0.74
ZHX3-220ENST00000560759 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
ZHX3-220ENST00000560759 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
ZHX3-220ENST00000560759 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
ZHX3-220ENST00000560759 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
ZHX3-220ENST00000560759 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
ZHX3-220ENST00000560759 SP7Q8TDD2 431 aaPredicted RBP10.14□□□□□ -0.79
ZHX3-220ENST00000560759 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
ZHX3-220ENST00000560759 FBLN2P98095 1184 aa10.04□□□□□ -0.8
ZHX3-220ENST00000560759 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
ZHX3-220ENST00000560759 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
ZHX3-220ENST00000560759 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
ZHX3-220ENST00000560759 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
ZHX3-220ENST00000560759 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
ZHX3-220ENST00000560759 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
ZHX3-220ENST00000560759 SSUH2Q9Y2M2 353 aa9.87□□□□□ -0.83
ZHX3-220ENST00000560759 HAX1O00165 279 aa9.84□□□□□ -0.83
ZHX3-220ENST00000560759 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
ZHX3-220ENST00000560759 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
ZHX3-220ENST00000560759 PITPNM1O00562 1244 aa9.77□□□□□ -0.85
ZHX3-220ENST00000560759 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
ZHX3-220ENST00000560759 SPDYE1Q8NFV5 336 aaPredicted RBP9.7□□□□□ -0.86
ZHX3-220ENST00000560759 PABPN1Q86U42 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
ZHX3-220ENST00000560759 EVX2Q03828 476 aa9.68□□□□□ -0.86
ZHX3-220ENST00000560759 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
ZHX3-220ENST00000560759 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
ZHX3-220ENST00000560759 PROM2Q8N271 834 aa9.57□□□□□ -0.88
ZHX3-220ENST00000560759 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
ZHX3-220ENST00000560759 LHX8Q68G74 356 aa9.51□□□□□ -0.89
ZHX3-220ENST00000560759 STAG3Q9UJ98 1225 aa9.51□□□□□ -0.89
ZHX3-220ENST00000560759 PRKAR2AP13861 404 aaKnown RBP9.5□□□□□ -0.89
ZHX3-220ENST00000560759 PLSCR2Q9NRY7 297 aa9.42□□□□□ -0.9
ZHX3-220ENST00000560759 CHADLQ6NUI6 762 aa9.41□□□□□ -0.9
ZHX3-220ENST00000560759 GABBR2O75899 941 aa9.4□□□□□ -0.9
ZHX3-220ENST00000560759 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
ZHX3-220ENST00000560759 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
ZHX3-220ENST00000560759 FKBP8Q14318 412 aa9.36□□□□□ -0.91
ZHX3-220ENST00000560759 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
ZHX3-220ENST00000560759 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
ZHX3-220ENST00000560759 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
ZHX3-220ENST00000560759 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
ZHX3-220ENST00000560759 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
ZHX3-220ENST00000560759 CLCN6P51797 869 aa9.16□□□□□ -0.94
ZHX3-220ENST00000560759 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
ZHX3-220ENST00000560759 MIER1Q8N108 512 aa9.15□□□□□ -0.94
ZHX3-220ENST00000560759 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
ZHX3-220ENST00000560759 PLEKHG5O94827 1062 aa9.11□□□□□ -0.95
ZHX3-220ENST00000560759 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
ZHX3-220ENST00000560759 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
ZHX3-220ENST00000560759 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
ZHX3-220ENST00000560759 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
ZHX3-220ENST00000560759 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
ZHX3-220ENST00000560759 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
ZHX3-220ENST00000560759 NUBP1P53384 320 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms